BLASTX nr result

ID: Coptis24_contig00033608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033608
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234122.1| Pathogenesis-related protein STH-2-like [Sol...    94   2e-17
ref|XP_002328585.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
gb|AAU00066.1| pathogenesis-related protein 10 [Solanum virginia...    92   4e-17
gb|AFK38659.1| unknown [Lotus japonicus]                               91   1e-16
gb|ADK39021.1| pollen allergen [Ostrya carpinifolia]                   90   2e-16

>ref|NP_001234122.1| Pathogenesis-related protein STH-2-like [Solanum lycopersicum]
           gi|62751099|dbj|BAD95797.1| similar to
           pathogenesis-related protein STH-2 [Solanum
           lycopersicum]
          Length = 155

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 42/84 (50%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
 Frame = +3

Query: 12  GSINQVNFVDGHPVKFVKHRLDKRDAANYECNYTVIESDTFGDKVECVANEVKFEDAPDG 191
           GSI ++NFV+G P+K++KH++   D  N    Y++IE D  GDK+E + ++VKFE A +G
Sbjct: 47  GSIKKINFVEGGPIKYLKHKIHAIDDKNLVTKYSLIEGDVLGDKLESITHDVKFEPAGNG 106

Query: 192 GCICKIKSCVHPKGDAVL-DEEHS 260
           GC+CK K+  H KGD VL DEEH+
Sbjct: 107 GCVCKTKTEYHTKGDYVLKDEEHN 130


>ref|XP_002328585.1| predicted protein [Populus trichocarpa] gi|222838567|gb|EEE76932.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/84 (51%), Positives = 55/84 (65%)
 Frame = +3

Query: 3   GSPGSINQVNFVDGHPVKFVKHRLDKRDAANYECNYTVIESDTFGDKVECVANEVKFEDA 182
           G  GSI QVNF +G  +K+VKHR+D+ D  N  C YT+IE D+ G+K+E +A EV+FE  
Sbjct: 49  GGAGSIEQVNFTEGTDIKYVKHRIDELDRVNLVCKYTMIEGDSLGEKLESIAYEVRFEVG 108

Query: 183 PDGGCICKIKSCVHPKGDAVLDEE 254
            DGGC CK+ S     GD  L EE
Sbjct: 109 SDGGCDCKMTSSYLMLGDFTLKEE 132


>gb|AAU00066.1| pathogenesis-related protein 10 [Solanum virginianum]
          Length = 160

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 40/84 (47%), Positives = 57/84 (67%)
 Frame = +3

Query: 3   GSPGSINQVNFVDGHPVKFVKHRLDKRDAANYECNYTVIESDTFGDKVECVANEVKFEDA 182
           G  GSI Q+NFV+G P+K++KH++   D  N E  Y++IE D  GDK+E +  ++KFE +
Sbjct: 49  GGAGSIKQMNFVEGGPIKYLKHKIHVIDDKNLETKYSLIEGDVLGDKLESINYDIKFEAS 108

Query: 183 PDGGCICKIKSCVHPKGDAVLDEE 254
            DGGC+CK  +  H KGD V+ EE
Sbjct: 109 GDGGCVCKTTTEYHTKGDHVITEE 132


>gb|AFK38659.1| unknown [Lotus japonicus]
          Length = 160

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/84 (50%), Positives = 54/84 (64%)
 Frame = +3

Query: 3   GSPGSINQVNFVDGHPVKFVKHRLDKRDAANYECNYTVIESDTFGDKVECVANEVKFEDA 182
           G  GSI QVNF +  P K++K R+D+ D  N+ C YT+IE D  GDK+E +A EVKFE  
Sbjct: 49  GEAGSIEQVNFNEASPFKYLKQRIDEVDKENFICKYTMIEGDPLGDKLESIAYEVKFEAT 108

Query: 183 PDGGCICKIKSCVHPKGDAVLDEE 254
            DGGC+CK+ S     GD  + EE
Sbjct: 109 SDGGCLCKMTSHYKTNGDFEVQEE 132


>gb|ADK39021.1| pollen allergen [Ostrya carpinifolia]
          Length = 160

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/84 (51%), Positives = 56/84 (66%)
 Frame = +3

Query: 3   GSPGSINQVNFVDGHPVKFVKHRLDKRDAANYECNYTVIESDTFGDKVECVANEVKFEDA 182
           G PG+I  + F +G P KFVK R+D+ D AN++ NYTVIE D  GDK+E V++E+K   A
Sbjct: 49  GGPGTIKNITFAEGSPFKFVKERVDEVDNANFKYNYTVIEGDVLGDKLEKVSHELKIVAA 108

Query: 183 PDGGCICKIKSCVHPKGDAVLDEE 254
           P GG I KI S  H KGD  ++ E
Sbjct: 109 PGGGSILKISSKFHAKGDHEVNAE 132


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