BLASTX nr result
ID: Coptis24_contig00033608
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00033608 (262 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001234122.1| Pathogenesis-related protein STH-2-like [Sol... 94 2e-17 ref|XP_002328585.1| predicted protein [Populus trichocarpa] gi|2... 92 3e-17 gb|AAU00066.1| pathogenesis-related protein 10 [Solanum virginia... 92 4e-17 gb|AFK38659.1| unknown [Lotus japonicus] 91 1e-16 gb|ADK39021.1| pollen allergen [Ostrya carpinifolia] 90 2e-16 >ref|NP_001234122.1| Pathogenesis-related protein STH-2-like [Solanum lycopersicum] gi|62751099|dbj|BAD95797.1| similar to pathogenesis-related protein STH-2 [Solanum lycopersicum] Length = 155 Score = 93.6 bits (231), Expect = 2e-17 Identities = 42/84 (50%), Positives = 60/84 (71%), Gaps = 1/84 (1%) Frame = +3 Query: 12 GSINQVNFVDGHPVKFVKHRLDKRDAANYECNYTVIESDTFGDKVECVANEVKFEDAPDG 191 GSI ++NFV+G P+K++KH++ D N Y++IE D GDK+E + ++VKFE A +G Sbjct: 47 GSIKKINFVEGGPIKYLKHKIHAIDDKNLVTKYSLIEGDVLGDKLESITHDVKFEPAGNG 106 Query: 192 GCICKIKSCVHPKGDAVL-DEEHS 260 GC+CK K+ H KGD VL DEEH+ Sbjct: 107 GCVCKTKTEYHTKGDYVLKDEEHN 130 >ref|XP_002328585.1| predicted protein [Populus trichocarpa] gi|222838567|gb|EEE76932.1| predicted protein [Populus trichocarpa] Length = 160 Score = 92.4 bits (228), Expect = 3e-17 Identities = 43/84 (51%), Positives = 55/84 (65%) Frame = +3 Query: 3 GSPGSINQVNFVDGHPVKFVKHRLDKRDAANYECNYTVIESDTFGDKVECVANEVKFEDA 182 G GSI QVNF +G +K+VKHR+D+ D N C YT+IE D+ G+K+E +A EV+FE Sbjct: 49 GGAGSIEQVNFTEGTDIKYVKHRIDELDRVNLVCKYTMIEGDSLGEKLESIAYEVRFEVG 108 Query: 183 PDGGCICKIKSCVHPKGDAVLDEE 254 DGGC CK+ S GD L EE Sbjct: 109 SDGGCDCKMTSSYLMLGDFTLKEE 132 >gb|AAU00066.1| pathogenesis-related protein 10 [Solanum virginianum] Length = 160 Score = 92.0 bits (227), Expect = 4e-17 Identities = 40/84 (47%), Positives = 57/84 (67%) Frame = +3 Query: 3 GSPGSINQVNFVDGHPVKFVKHRLDKRDAANYECNYTVIESDTFGDKVECVANEVKFEDA 182 G GSI Q+NFV+G P+K++KH++ D N E Y++IE D GDK+E + ++KFE + Sbjct: 49 GGAGSIKQMNFVEGGPIKYLKHKIHVIDDKNLETKYSLIEGDVLGDKLESINYDIKFEAS 108 Query: 183 PDGGCICKIKSCVHPKGDAVLDEE 254 DGGC+CK + H KGD V+ EE Sbjct: 109 GDGGCVCKTTTEYHTKGDHVITEE 132 >gb|AFK38659.1| unknown [Lotus japonicus] Length = 160 Score = 90.9 bits (224), Expect = 1e-16 Identities = 42/84 (50%), Positives = 54/84 (64%) Frame = +3 Query: 3 GSPGSINQVNFVDGHPVKFVKHRLDKRDAANYECNYTVIESDTFGDKVECVANEVKFEDA 182 G GSI QVNF + P K++K R+D+ D N+ C YT+IE D GDK+E +A EVKFE Sbjct: 49 GEAGSIEQVNFNEASPFKYLKQRIDEVDKENFICKYTMIEGDPLGDKLESIAYEVKFEAT 108 Query: 183 PDGGCICKIKSCVHPKGDAVLDEE 254 DGGC+CK+ S GD + EE Sbjct: 109 SDGGCLCKMTSHYKTNGDFEVQEE 132 >gb|ADK39021.1| pollen allergen [Ostrya carpinifolia] Length = 160 Score = 89.7 bits (221), Expect = 2e-16 Identities = 43/84 (51%), Positives = 56/84 (66%) Frame = +3 Query: 3 GSPGSINQVNFVDGHPVKFVKHRLDKRDAANYECNYTVIESDTFGDKVECVANEVKFEDA 182 G PG+I + F +G P KFVK R+D+ D AN++ NYTVIE D GDK+E V++E+K A Sbjct: 49 GGPGTIKNITFAEGSPFKFVKERVDEVDNANFKYNYTVIEGDVLGDKLEKVSHELKIVAA 108 Query: 183 PDGGCICKIKSCVHPKGDAVLDEE 254 P GG I KI S H KGD ++ E Sbjct: 109 PGGGSILKISSKFHAKGDHEVNAE 132