BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033592
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...    67   2e-09
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    65   6e-09
ref|XP_003614689.1| F-box/kelch-repeat protein [Medicago truncat...    62   4e-08
ref|XP_003614663.1| F-box/kelch-repeat protein [Medicago truncat...    62   4e-08

>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 40/133 (30%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
 Frame = -2

Query: 408 IFPRIPLKSLSQCRWVCTTWYNLILHPRFAQIHYHFSIQNNSSPFLILTDTQASH---MY 238
           IF R+P+K L +CR +C TWY+LI +  F   H  ++I +N++ +LIL     S+    +
Sbjct: 13  IFLRLPVKQLLRCRCICKTWYSLISNHNFISTHSRYTIDSNNNNYLILRHYSRSNKKERF 72

Query: 237 VIDSQIFDNFEPAQVERVALKRLVNELMVIGYANGLICVAEDFKHCRYTRSYVIYNPITG 58
            +     D F   Q     L+   +   ++G  NG+IC+ ++  H    +  V++NP  G
Sbjct: 73  ALHFDDDDMFSEYQELDFPLESSWDYFEIVGSCNGIICLTDN--HSHILKRIVLWNPSIG 130

Query: 57  DYVALPSDTCIFK 19
             V LP     +K
Sbjct: 131 LSVTLPLQRISYK 143


>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
           gi|223528011|gb|EEF30092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 410

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
 Frame = -2

Query: 411 NIFPRIPLKSLSQCRWVCTTWYNLILHPRFAQIHYHFSIQNNSSPFLILTDTQ-ASHMYV 235
           +I  R+P+  L   + VC  W +L+ HP  A +H+     NN    L+L D    SH+Y 
Sbjct: 33  DILSRLPITHLINVKRVCRFWRSLVQHPLLASMHFSRIANNNDPCLLLLCDLPIKSHLYS 92

Query: 234 IDSQIFDNFEPAQVERVALKRLVNELMVIGYANGLICVAEDFKHCRYTRSYVIYNPITGD 55
           +     D      V R+ +  ++ + +VIG  NGL+ + +  +     R+  IYNP T D
Sbjct: 93  LHFSALDETIIETVTRIPVP-VIPKFLVIGSCNGLLYLLDSLQQ----RANYIYNPFTSD 147

Query: 54  YVALP 40
           Y+ LP
Sbjct: 148 YLELP 152


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
 Frame = -2

Query: 420 IQNNIFPRIPLKSLSQCRWVCTTWYNLILHPRFAQIHYHFSIQNNSSPFLIL--TDTQAS 247
           I ++I  R+P+ SL Q + VC  W  L+  P+   ++   S Q+   P LIL       +
Sbjct: 32  IAHDILSRLPITSLVQFKCVCRAWRALVQDPQLVDLYLSCSTQDTDHPCLILHCDFPIRN 91

Query: 246 HMYVIDSQIFDNFEPAQVERV--ALKRLVNELMVIGYANGLICVAEDFKHCRYTRSYVIY 73
           ++Y +D    +  E  +V+R+      ++ E  V+G  NGL+C+++      Y  S  IY
Sbjct: 92  NLYFVDFAAHEE-EKEKVKRIPAPFSSMMPEFEVVGSCNGLLCLSDSL----YNDSLYIY 146

Query: 72  NPITGDYVALP 40
           NP TG Y  LP
Sbjct: 147 NPFTGCYKELP 157


>ref|XP_003614689.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355516024|gb|AES97647.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 518

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
 Frame = -2

Query: 435 LPTNIIQNNIFPRIPLKSLSQCRWVCTTWYNLILHPRFAQIHYHFSIQNNSSPFLILTDT 256
           +P ++I   I  R+P+K L Q R VC  W +LI  P+FA+ H+ FS    +    ILT +
Sbjct: 46  IPFDLIPE-ILHRLPVKPLMQFRCVCKWWNSLISDPKFAKKHFRFS---TTCLIHILTYS 101

Query: 255 QASHMYVIDSQIFDNFEPAQV--ERVALKRLVNELMV--IGYANGLICVAEDFKHCRYTR 88
             SH Y+I S   ++     V   ++A   + +   V  +G  NG+ICVAE   + R+  
Sbjct: 102 SLSHKYIIKSYPLNSLFTKDVAYNKIAQHEIASSHCVYNVGSCNGIICVAEYHIYERFA- 160

Query: 87  SYVIYNPITGDYVALP 40
            Y ++NP    +  LP
Sbjct: 161 IYRLWNPSIRKFKELP 176


>ref|XP_003614663.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355515998|gb|AES97621.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 1043

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
 Frame = -2

Query: 435 LPTNIIQNNIFPRIPLKSLSQCRWVCTTWYNLILHPRFAQIHYHFSIQNNSSPFLILTDT 256
           +P ++I   I  R+P+K L Q R VC  W +LI  P+FA+ H+ FS    +    ILT +
Sbjct: 46  IPFDLIPE-ILHRLPVKPLMQFRCVCKWWNSLISDPKFAKKHFRFS---TTCLIHILTYS 101

Query: 255 QASHMYVIDSQIFDNFEPAQV--ERVALKRLVNELMV--IGYANGLICVAEDFKHCRYTR 88
             SH Y+I S   ++     V   ++A   + +   V  +G  NG+ICVAE   + R+  
Sbjct: 102 SLSHKYIIKSYPLNSLFTKDVAYNKIAQHEIASSHCVYNVGSCNGIICVAEYHIYERFA- 160

Query: 87  SYVIYNPITGDYVALP 40
            Y ++NP    +  LP
Sbjct: 161 IYRLWNPSIRKFKELP 176