BLASTX nr result

ID: Coptis24_contig00033574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033574
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514872.1| conserved hypothetical protein [Ricinus comm...    97   2e-18
ref|XP_002264994.2| PREDICTED: uncharacterized protein LOC100254...    92   3e-17
emb|CBI38156.3| unnamed protein product [Vitis vinifera]               92   3e-17
emb|CAN82435.1| hypothetical protein VITISV_040457 [Vitis vinifera]    92   3e-17
emb|CBI21322.3| unnamed protein product [Vitis vinifera]               90   2e-16

>ref|XP_002514872.1| conserved hypothetical protein [Ricinus communis]
           gi|223545923|gb|EEF47426.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1590

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 45/88 (51%), Positives = 63/88 (71%), Gaps = 2/88 (2%)
 Frame = -3

Query: 261 KESAEGRGSTSADRWNDAGKGSSGLETRREGRWSTRWGPDDKEKDSWS--KTRISTKKED 88
           +E+ E R   S++RW+D    +SG E RR+ +WS+RWGPDDKEKDS +  +T +  +KED
Sbjct: 145 RETMENRVLPSSERWHDGTNRNSGHEARRDSKWSSRWGPDDKEKDSRAERRTDVDKEKED 204

Query: 87  SLNDNKSSVGSTRTTYKRGTDSRDKWRP 4
             NDN+SS+ S R+  +R +DSRDKWRP
Sbjct: 205 VHNDNQSSIVSNRSVSERESDSRDKWRP 232


>ref|XP_002264994.2| PREDICTED: uncharacterized protein LOC100254102 [Vitis vinifera]
          Length = 1593

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 40/86 (46%), Positives = 61/86 (70%)
 Frame = -3

Query: 261 KESAEGRGSTSADRWNDAGKGSSGLETRREGRWSTRWGPDDKEKDSWSKTRISTKKEDSL 82
           +ES + R   +++RW+D    +S  ETRR+ +WS+RWGP+++EK+S ++ R    KED+ 
Sbjct: 121 RESIDSRALPTSERWHDGSNRNSVHETRRDSKWSSRWGPEEREKESRTEKRPDVDKEDAH 180

Query: 81  NDNKSSVGSTRTTYKRGTDSRDKWRP 4
           +DN+S VGS R   +R +DSRDKWRP
Sbjct: 181 SDNQSFVGSNRPAPERDSDSRDKWRP 206


>emb|CBI38156.3| unnamed protein product [Vitis vinifera]
          Length = 946

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 40/86 (46%), Positives = 61/86 (70%)
 Frame = -3

Query: 261 KESAEGRGSTSADRWNDAGKGSSGLETRREGRWSTRWGPDDKEKDSWSKTRISTKKEDSL 82
           +ES + R   +++RW+D    +S  ETRR+ +WS+RWGP+++EK+S ++ R    KED+ 
Sbjct: 146 RESIDSRALPTSERWHDGSNRNSVHETRRDSKWSSRWGPEEREKESRTEKRPDVDKEDAH 205

Query: 81  NDNKSSVGSTRTTYKRGTDSRDKWRP 4
           +DN+S VGS R   +R +DSRDKWRP
Sbjct: 206 SDNQSFVGSNRPAPERDSDSRDKWRP 231


>emb|CAN82435.1| hypothetical protein VITISV_040457 [Vitis vinifera]
          Length = 1555

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 40/86 (46%), Positives = 61/86 (70%)
 Frame = -3

Query: 261 KESAEGRGSTSADRWNDAGKGSSGLETRREGRWSTRWGPDDKEKDSWSKTRISTKKEDSL 82
           +ES + R   +++RW+D    +S  ETRR+ +WS+RWGP+++EK+S ++ R    KED+ 
Sbjct: 139 RESIDSRALPTSERWHDGSNRNSVHETRRDSKWSSRWGPEEREKESRTEKRPDVDKEDAH 198

Query: 81  NDNKSSVGSTRTTYKRGTDSRDKWRP 4
           +DN+S VGS R   +R +DSRDKWRP
Sbjct: 199 SDNQSFVGSNRPAPERDSDSRDKWRP 224


>emb|CBI21322.3| unnamed protein product [Vitis vinifera]
          Length = 1665

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 45/86 (52%), Positives = 59/86 (68%)
 Frame = -3

Query: 261 KESAEGRGSTSADRWNDAGKGSSGLETRREGRWSTRWGPDDKEKDSWSKTRISTKKEDSL 82
           +E+AE R  TS+DRW+D  + SS  E RR+ +WS+RWGP+DKEKDS ++ R   +KED  
Sbjct: 152 RETAESRALTSSDRWHDNNR-SSVHEPRRDNKWSSRWGPEDKEKDSRTEKRTDVEKEDPH 210

Query: 81  NDNKSSVGSTRTTYKRGTDSRDKWRP 4
            D K S  + RT  +R  DSRDKWRP
Sbjct: 211 VD-KQSFSANRTAAERDNDSRDKWRP 235


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