BLASTX nr result

ID: Coptis24_contig00033557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033557
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312133.1| predicted protein [Populus trichocarpa] gi|2...   301   4e-80
ref|XP_002530400.1| conserved hypothetical protein [Ricinus comm...   299   2e-79
ref|XP_002315186.1| predicted protein [Populus trichocarpa] gi|2...   296   1e-78
ref|XP_002276362.1| PREDICTED: uncharacterized protein LOC100263...   293   2e-77
emb|CAN65630.1| hypothetical protein VITISV_019369 [Vitis vinifera]   293   2e-77

>ref|XP_002312133.1| predicted protein [Populus trichocarpa] gi|222851953|gb|EEE89500.1|
           predicted protein [Populus trichocarpa]
          Length = 428

 Score =  301 bits (771), Expect = 4e-80
 Identities = 146/180 (81%), Positives = 161/180 (89%)
 Frame = -3

Query: 540 ELVLSGCKISAGSDGKVAWRQTPWHHSHAXXXXXXXXXXXLQGVDPRSTANLFSNSICMG 361
           ELV+SGCKISAGSDGKVAWRQTPWHHSHA           LQG+DP+STANLFSNS+C G
Sbjct: 177 ELVVSGCKISAGSDGKVAWRQTPWHHSHASRGPPRPLRRFLQGLDPKSTANLFSNSVCTG 236

Query: 360 EKAINEEDCFVLKLEAEPFTLRARSSSNVEIIRHTIWGYFSQKTGLLVKLEDSHLLRIKT 181
           EKAIN EDCFVLKLEAEP +LRARSSSNVEIIRHT+WGYFSQ+TGLLV+LEDSHLLRIK 
Sbjct: 237 EKAINNEDCFVLKLEAEPSSLRARSSSNVEIIRHTLWGYFSQRTGLLVQLEDSHLLRIKA 296

Query: 180 AGDNSIYWETTMESLIQDYRTIDGINIAHGGRTFVSLFRFGESTESHSRTRMEEVWTIEE 1
           +G++SI+WETTMES IQDYRTIDGINIA+ GRT VSLFRFGE++ESHSRTRMEEVW IEE
Sbjct: 297 SGNDSIFWETTMESTIQDYRTIDGINIAYKGRTSVSLFRFGETSESHSRTRMEEVWAIEE 356


>ref|XP_002530400.1| conserved hypothetical protein [Ricinus communis]
           gi|223530049|gb|EEF31970.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 425

 Score =  299 bits (766), Expect = 2e-79
 Identities = 144/180 (80%), Positives = 161/180 (89%)
 Frame = -3

Query: 540 ELVLSGCKISAGSDGKVAWRQTPWHHSHAXXXXXXXXXXXLQGVDPRSTANLFSNSICMG 361
           ELV+SGCKISAGSDGKVAWRQTPWHHSHA           LQG+DP+STANLFSNSIC G
Sbjct: 176 ELVVSGCKISAGSDGKVAWRQTPWHHSHASRGPPRPLRRFLQGLDPKSTANLFSNSICAG 235

Query: 360 EKAINEEDCFVLKLEAEPFTLRARSSSNVEIIRHTIWGYFSQKTGLLVKLEDSHLLRIKT 181
           EKAIN EDCF+LKLEAE  +LRARS+SNVE+IRHT+WGYFSQ+TGLLV+LEDSHLLRIK 
Sbjct: 236 EKAINGEDCFILKLEAETSSLRARSTSNVEMIRHTVWGYFSQRTGLLVQLEDSHLLRIKA 295

Query: 180 AGDNSIYWETTMESLIQDYRTIDGINIAHGGRTFVSLFRFGESTESHSRTRMEEVWTIEE 1
           +G++SI+WET+MES I DYRTIDGINIAHGGRT VSLFRFGE++ESHSRTRMEEVWTIEE
Sbjct: 296 SGNDSIFWETSMESTIHDYRTIDGINIAHGGRTSVSLFRFGENSESHSRTRMEEVWTIEE 355


>ref|XP_002315186.1| predicted protein [Populus trichocarpa] gi|222864226|gb|EEF01357.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  296 bits (758), Expect = 1e-78
 Identities = 142/180 (78%), Positives = 159/180 (88%)
 Frame = -3

Query: 540 ELVLSGCKISAGSDGKVAWRQTPWHHSHAXXXXXXXXXXXLQGVDPRSTANLFSNSICMG 361
           ELV+SGCKISAGSDGKVAWRQTPWHHSHA           LQG+DP+STANLFSNS+C G
Sbjct: 177 ELVVSGCKISAGSDGKVAWRQTPWHHSHASRGPPRPLRRFLQGLDPKSTANLFSNSVCTG 236

Query: 360 EKAINEEDCFVLKLEAEPFTLRARSSSNVEIIRHTIWGYFSQKTGLLVKLEDSHLLRIKT 181
           EK IN EDCFVLKLEA+P +LRARS+SNVEIIRHT+WGYFSQ+TGLLV+LEDSHLLRIK 
Sbjct: 237 EKTINNEDCFVLKLEADPSSLRARSTSNVEIIRHTVWGYFSQRTGLLVQLEDSHLLRIKA 296

Query: 180 AGDNSIYWETTMESLIQDYRTIDGINIAHGGRTFVSLFRFGESTESHSRTRMEEVWTIEE 1
            G++SI+WETTMES IQDYRTIDGINIA+ GRT VSLFRFGE++ESHSRTRMEE+W IEE
Sbjct: 297 PGNDSIFWETTMESSIQDYRTIDGINIAYKGRTSVSLFRFGETSESHSRTRMEEIWAIEE 356


>ref|XP_002276362.1| PREDICTED: uncharacterized protein LOC100263234 [Vitis vinifera]
           gi|296086114|emb|CBI31555.3| unnamed protein product
           [Vitis vinifera]
          Length = 426

 Score =  293 bits (749), Expect = 2e-77
 Identities = 140/180 (77%), Positives = 157/180 (87%)
 Frame = -3

Query: 540 ELVLSGCKISAGSDGKVAWRQTPWHHSHAXXXXXXXXXXXLQGVDPRSTANLFSNSICMG 361
           ELV+SGCKISAGSDG VAWRQTPWHHSHA           LQG+DPRSTANLFSNS+C+G
Sbjct: 175 ELVVSGCKISAGSDGVVAWRQTPWHHSHASRGPPRPLRRALQGLDPRSTANLFSNSVCIG 234

Query: 360 EKAINEEDCFVLKLEAEPFTLRARSSSNVEIIRHTIWGYFSQKTGLLVKLEDSHLLRIKT 181
           EK INEEDCF+LKLE E  TLRARSS NVEI+RHT+WGYFSQ+TGLLV+L D+HLLRIK+
Sbjct: 235 EKTINEEDCFILKLETETSTLRARSSRNVEIMRHTVWGYFSQRTGLLVQLADTHLLRIKS 294

Query: 180 AGDNSIYWETTMESLIQDYRTIDGINIAHGGRTFVSLFRFGESTESHSRTRMEEVWTIEE 1
           + D+SI+WETTMESLIQDYRTIDG+NIAH G T VSLFRFGE++ESHSRTRMEE WTIEE
Sbjct: 295 SADDSIFWETTMESLIQDYRTIDGVNIAHAGTTAVSLFRFGENSESHSRTRMEERWTIEE 354


>emb|CAN65630.1| hypothetical protein VITISV_019369 [Vitis vinifera]
          Length = 426

 Score =  293 bits (749), Expect = 2e-77
 Identities = 140/180 (77%), Positives = 157/180 (87%)
 Frame = -3

Query: 540 ELVLSGCKISAGSDGKVAWRQTPWHHSHAXXXXXXXXXXXLQGVDPRSTANLFSNSICMG 361
           ELV+SGCKISAGSDG VAWRQTPWHHSHA           LQG+DPRSTANLFSNS+C+G
Sbjct: 175 ELVVSGCKISAGSDGVVAWRQTPWHHSHASRGPPRPLRRALQGLDPRSTANLFSNSVCIG 234

Query: 360 EKAINEEDCFVLKLEAEPFTLRARSSSNVEIIRHTIWGYFSQKTGLLVKLEDSHLLRIKT 181
           EK INEEDCF+LKLE E  TLRARSS NVEI+RHT+WGYFSQ+TGLLV+L D+HLLRIK+
Sbjct: 235 EKTINEEDCFILKLETETSTLRARSSRNVEIMRHTVWGYFSQRTGLLVQLADTHLLRIKS 294

Query: 180 AGDNSIYWETTMESLIQDYRTIDGINIAHGGRTFVSLFRFGESTESHSRTRMEEVWTIEE 1
           + D+SI+WETTMESLIQDYRTIDG+NIAH G T VSLFRFGE++ESHSRTRMEE WTIEE
Sbjct: 295 SADDSIFWETTMESLIQDYRTIDGVNIAHAGTTAVSLFRFGENSESHSRTRMEERWTIEE 354


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