BLASTX nr result

ID: Coptis24_contig00033540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033540
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283486.2| PREDICTED: uncharacterized protein LOC100254...   172   2e-41
emb|CBI19369.3| unnamed protein product [Vitis vinifera]              172   2e-41
ref|XP_002320674.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_002510057.1| ATP binding protein, putative [Ricinus commu...   165   3e-39
ref|XP_002888202.1| ZCF125 [Arabidopsis lyrata subsp. lyrata] gi...   164   7e-39

>ref|XP_002283486.2| PREDICTED: uncharacterized protein LOC100254027 [Vitis vinifera]
          Length = 846

 Score =  172 bits (437), Expect = 2e-41
 Identities = 81/104 (77%), Positives = 94/104 (90%)
 Frame = +2

Query: 2   LHKSLDTPVSGISYAFDHVFDEDCTNSRVYDHLSKDIIRAAVEGFNGTAFAYGQTSSGKT 181
           LHK+L TP+SG+S+AFDHVFD+ C N+RVY+ L KDII AAVEGFNGTAFAYGQTSSGKT
Sbjct: 33  LHKTLGTPISGVSHAFDHVFDQSCANARVYELLIKDIIHAAVEGFNGTAFAYGQTSSGKT 92

Query: 182 YTMNGSENDPGIVPLAVEDVFQNIMMMSDREFLIRVSYLEIYNE 313
           YTMNGSE+DPGI+ LAV+DVF+ I M +DREFLIRVSY+EIYNE
Sbjct: 93  YTMNGSESDPGIIHLAVKDVFRRIQMTADREFLIRVSYMEIYNE 136


>emb|CBI19369.3| unnamed protein product [Vitis vinifera]
          Length = 840

 Score =  172 bits (437), Expect = 2e-41
 Identities = 81/104 (77%), Positives = 94/104 (90%)
 Frame = +2

Query: 2   LHKSLDTPVSGISYAFDHVFDEDCTNSRVYDHLSKDIIRAAVEGFNGTAFAYGQTSSGKT 181
           LHK+L TP+SG+S+AFDHVFD+ C N+RVY+ L KDII AAVEGFNGTAFAYGQTSSGKT
Sbjct: 33  LHKTLGTPISGVSHAFDHVFDQSCANARVYELLIKDIIHAAVEGFNGTAFAYGQTSSGKT 92

Query: 182 YTMNGSENDPGIVPLAVEDVFQNIMMMSDREFLIRVSYLEIYNE 313
           YTMNGSE+DPGI+ LAV+DVF+ I M +DREFLIRVSY+EIYNE
Sbjct: 93  YTMNGSESDPGIIHLAVKDVFRRIQMTADREFLIRVSYMEIYNE 136


>ref|XP_002320674.1| predicted protein [Populus trichocarpa] gi|222861447|gb|EEE98989.1|
           predicted protein [Populus trichocarpa]
          Length = 816

 Score =  166 bits (419), Expect = 2e-39
 Identities = 77/104 (74%), Positives = 93/104 (89%)
 Frame = +2

Query: 2   LHKSLDTPVSGISYAFDHVFDEDCTNSRVYDHLSKDIIRAAVEGFNGTAFAYGQTSSGKT 181
           LHKS  +P+SG+SYAFDHVFDE CTNSRVY+ L+KD+I AAV+GFNGT FAYGQTSSGKT
Sbjct: 36  LHKSHGSPISGVSYAFDHVFDESCTNSRVYELLTKDLILAAVDGFNGTVFAYGQTSSGKT 95

Query: 182 YTMNGSENDPGIVPLAVEDVFQNIMMMSDREFLIRVSYLEIYNE 313
           +TMNGS+ND GI+  AV+D+F+ I M+S+REFLIRVSY+EIYNE
Sbjct: 96  FTMNGSQNDGGIIHRAVKDIFEKIHMISEREFLIRVSYMEIYNE 139


>ref|XP_002510057.1| ATP binding protein, putative [Ricinus communis]
           gi|223550758|gb|EEF52244.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 842

 Score =  165 bits (418), Expect = 3e-39
 Identities = 77/104 (74%), Positives = 91/104 (87%)
 Frame = +2

Query: 2   LHKSLDTPVSGISYAFDHVFDEDCTNSRVYDHLSKDIIRAAVEGFNGTAFAYGQTSSGKT 181
           L KS  TP+SG+SYAFDHVFDE CTN+++Y+ L+KDII AAV+GFNGTAFAYGQTSSGKT
Sbjct: 34  LRKSDSTPISGVSYAFDHVFDESCTNAKIYELLTKDIIHAAVDGFNGTAFAYGQTSSGKT 93

Query: 182 YTMNGSENDPGIVPLAVEDVFQNIMMMSDREFLIRVSYLEIYNE 313
           +TMNGSENDPGI+  AV+D+F  I M  +REFLIRVSY+EIYNE
Sbjct: 94  FTMNGSENDPGIIHRAVKDIFNKIEMTCNREFLIRVSYMEIYNE 137


>ref|XP_002888202.1| ZCF125 [Arabidopsis lyrata subsp. lyrata]
           gi|297334043|gb|EFH64461.1| ZCF125 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 827

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/104 (75%), Positives = 90/104 (86%)
 Frame = +2

Query: 2   LHKSLDTPVSGISYAFDHVFDEDCTNSRVYDHLSKDIIRAAVEGFNGTAFAYGQTSSGKT 181
           LHKSLDTP++  SYAFDHVFDE  TN+ VY+ L+KDII AAVEGFNGTAFAYGQTSSGKT
Sbjct: 35  LHKSLDTPITTASYAFDHVFDESSTNASVYELLTKDIIHAAVEGFNGTAFAYGQTSSGKT 94

Query: 182 YTMNGSENDPGIVPLAVEDVFQNIMMMSDREFLIRVSYLEIYNE 313
           +TM GSE DPGI+  +V DVF+ I M+SDREFLIRVSY+EIYNE
Sbjct: 95  FTMTGSETDPGIIRRSVRDVFERIHMISDREFLIRVSYMEIYNE 138


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