BLASTX nr result

ID: Coptis24_contig00033518 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033518
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79490.1| hypothetical protein VITISV_033371 [Vitis vinifera]    55   4e-11
emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]    55   4e-11
emb|CAN73982.1| hypothetical protein VITISV_007640 [Vitis vinifera]    54   5e-11
emb|CAN69687.1| hypothetical protein VITISV_026773 [Vitis vinifera]    55   7e-11
emb|CAN73385.1| hypothetical protein VITISV_006444 [Vitis vinifera]    60   1e-10

>emb|CAN79490.1| hypothetical protein VITISV_033371 [Vitis vinifera]
          Length = 1341

 Score = 54.7 bits (130), Expect(2) = 4e-11
 Identities = 24/54 (44%), Positives = 35/54 (64%)
 Frame = +1

Query: 181  VLVANEEIEDREVGGILGPICKIDLTKAYDHVS*EFMDYLKSLAGNG*KWRKWV 342
            VL+ANE +++R   G  G + KID  KAYDHV  +F+D++    G   +WRKW+
Sbjct: 1130 VLIANEIVDERRQSGEEGVVFKIDFEKAYDHVKWDFLDHVLEKKGFSPRWRKWM 1183



 Score = 37.7 bits (86), Expect(2) = 4e-11
 Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
 Frame = +2

Query: 11   KSGTEDISNLRPISLIGSV*D-HTRMLSVRLKGVIFNLIAEKQGYQGSFVSGR 166
            KS T+ ISN RPISLI S+    T++LS RL+GV+   I      QG+FV GR
Sbjct: 1075 KSLTKRISNFRPISLITSLYKIITKVLSGRLRGVLHETI---HYTQGAFVQGR 1124


>emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]
          Length = 1201

 Score = 55.1 bits (131), Expect(2) = 4e-11
 Identities = 26/54 (48%), Positives = 35/54 (64%)
 Frame = +1

Query: 181 VLVANEEIEDREVGGILGPICKIDLTKAYDHVS*EFMDYLKSLAGNG*KWRKWV 342
           VLVANE I+ R+     G +CK+D+ KAYDHV+  F+  +    G G KWRKW+
Sbjct: 541 VLVANEAIDSRKRSVGTGLVCKLDIEKAYDHVNWRFLMSVLEKMGFGPKWRKWI 594



 Score = 37.4 bits (85), Expect(2) = 4e-11
 Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
 Frame = +2

Query: 11  KSGTEDISNLRPISLIGSV*D-HTRMLSVRLKGVIFNLIAEKQGYQGSFVSGR 166
           K G  D+ + RPISL+GS+     ++L+ RLKGV+  L++     Q +FV GR
Sbjct: 486 KEGXSDVQDYRPISLVGSLYKIIAKVLANRLKGVMGKLVSNS---QNAFVEGR 535


>emb|CAN73982.1| hypothetical protein VITISV_007640 [Vitis vinifera]
          Length = 1927

 Score = 53.9 bits (128), Expect(2) = 5e-11
 Identities = 24/54 (44%), Positives = 34/54 (62%)
 Frame = +1

Query: 181  VLVANEEIEDREVGGILGPICKIDLTKAYDHVS*EFMDYLKSLAGNG*KWRKWV 342
            VL+ANE +++R   G  G + KID  KAYDH+  +F+D +    G   KWRKW+
Sbjct: 1265 VLIANEIVDERRQSGEEGVVFKIDFEKAYDHIRWDFLDQVLEKKGFSPKWRKWM 1318



 Score = 38.1 bits (87), Expect(2) = 5e-11
 Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
 Frame = +2

Query: 11   KSGTEDISNLRPISLIGSV*D-HTRMLSVRLKGVIFNLIAEKQGYQGSFVSGR 166
            KS T+ ISN RPISLI S+     ++LS RL+GV+   I      QG+FV GR
Sbjct: 1210 KSTTKKISNFRPISLITSLYKIIAKVLSGRLRGVLHETI---HSTQGAFVQGR 1259


>emb|CAN69687.1| hypothetical protein VITISV_026773 [Vitis vinifera]
          Length = 652

 Score = 55.5 bits (132), Expect(2) = 7e-11
 Identities = 25/54 (46%), Positives = 34/54 (62%)
 Frame = +1

Query: 181 VLVANEEIEDREVGGILGPICKIDLTKAYDHVS*EFMDYLKSLAGNG*KWRKWV 342
           VL+ANE +++R   G  G + KID  KAYDHV  +F+D +    G   KWRKW+
Sbjct: 313 VLIANETVDERRRSGEXGVVFKIDFEKAYDHVRWDFLDQVLEKKGFSPKWRKWM 366



 Score = 36.2 bits (82), Expect(2) = 7e-11
 Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
 Frame = +2

Query: 11  KSGTEDISNLRPISLIGSV*D-HTRMLSVRLKGVIFNLIAEKQGYQGSFVSGR 166
           KS T+ IS+ RPISLI S+     ++LS RL+GV+   I      QG+FV GR
Sbjct: 258 KSTTKKISDFRPISLITSLYKIIAKVLSGRLRGVLHETI---HSTQGAFVQGR 307


>emb|CAN73385.1| hypothetical protein VITISV_006444 [Vitis vinifera]
          Length = 722

 Score = 60.5 bits (145), Expect(2) = 1e-10
 Identities = 26/54 (48%), Positives = 38/54 (70%)
 Frame = +1

Query: 181 VLVANEEIEDREVGGILGPICKIDLTKAYDHVS*EFMDYLKSLAGNG*KWRKWV 342
           VL+ANE ++D+   G  G + KID  KAYDHVS +F+D++  + G G +WRKW+
Sbjct: 354 VLIANEIVDDKRKSGEEGVVFKIDFEKAYDHVSWDFLDHVLEMKGFGLRWRKWM 407



 Score = 30.4 bits (67), Expect(2) = 1e-10
 Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = +2

Query: 11  KSGTEDISNLRPISLIGSV*D-HTRMLSVRLKGVIFNLIAEKQGYQGSFVSGR 166
           KS +  IS+ +PISLI S+     ++L+ R++GV+   I      QG+FV GR
Sbjct: 299 KSMSRRISDFKPISLITSLYKIIAKVLAGRIRGVLHETI---HSTQGAFVQGR 348


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