BLASTX nr result

ID: Coptis24_contig00033472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033472
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280745.1| PREDICTED: bark storage protein A-like [Viti...   110   9e-23
emb|CBI28039.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_003528930.1| PREDICTED: bark storage protein A-like [Glyc...   102   4e-20
gb|ACU19785.1| unknown [Glycine max]                                  102   4e-20
ref|XP_002331152.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18

>ref|XP_002280745.1| PREDICTED: bark storage protein A-like [Vitis vinifera]
          Length = 338

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/87 (64%), Positives = 68/87 (78%)
 Frame = -2

Query: 261 LGFLLVVSTSNTITCVNGAVSKTSTRKIRKINSEGPYLGLVVPNAFEMTPLLQSPSFVAD 82
           +GFL++V      T   GAVS +S +KI ++N EGPYLG+VVPN++EM PLLQSPSFVAD
Sbjct: 1   MGFLVMVVVMGVGT--EGAVSVSSMKKITRVNKEGPYLGIVVPNSYEMDPLLQSPSFVAD 58

Query: 81  DKLAFLDISGRRFRIGTLETKKVIIVM 1
           DK  +LD +GRRFRIG LETK VIIVM
Sbjct: 59  DKFPYLDFAGRRFRIGKLETKNVIIVM 85


>emb|CBI28039.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/70 (72%), Positives = 60/70 (85%)
 Frame = -2

Query: 210 GAVSKTSTRKIRKINSEGPYLGLVVPNAFEMTPLLQSPSFVADDKLAFLDISGRRFRIGT 31
           GAVS +S +KI ++N EGPYLG+VVPN++EM PLLQSPSFVADDK  +LD +GRRFRIG 
Sbjct: 7   GAVSVSSMKKITRVNKEGPYLGIVVPNSYEMDPLLQSPSFVADDKFPYLDFAGRRFRIGK 66

Query: 30  LETKKVIIVM 1
           LETK VIIVM
Sbjct: 67  LETKNVIIVM 76


>ref|XP_003528930.1| PREDICTED: bark storage protein A-like [Glycine max]
          Length = 343

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/91 (59%), Positives = 69/91 (75%)
 Frame = -2

Query: 273 KFWLLGFLLVVSTSNTITCVNGAVSKTSTRKIRKINSEGPYLGLVVPNAFEMTPLLQSPS 94
           K  LLG LLV+   +TI+  NGAVS+ S R+I KIN EGPY+G+VVPNAFE+ PLL+SPS
Sbjct: 2   KMKLLG-LLVLVLGSTISA-NGAVSEVSWREISKINREGPYVGIVVPNAFELNPLLRSPS 59

Query: 93  FVADDKLAFLDISGRRFRIGTLETKKVIIVM 1
           FV  +K  + D +G+ FRIG LE K+VI+VM
Sbjct: 60  FVPHNKFPYFDFAGKHFRIGVLEKKRVIVVM 90


>gb|ACU19785.1| unknown [Glycine max]
          Length = 233

 Score =  102 bits (253), Expect = 4e-20
 Identities = 54/91 (59%), Positives = 69/91 (75%)
 Frame = -2

Query: 273 KFWLLGFLLVVSTSNTITCVNGAVSKTSTRKIRKINSEGPYLGLVVPNAFEMTPLLQSPS 94
           K  LLG LLV+   +TI+  NGAVS+ S R+I KIN EGPY+G+VVPNAFE+ PLL+SPS
Sbjct: 2   KMKLLG-LLVLVLGSTISA-NGAVSEVSWREISKINREGPYVGIVVPNAFELNPLLRSPS 59

Query: 93  FVADDKLAFLDISGRRFRIGTLETKKVIIVM 1
           FV  +K  + D +G+ FRIG LE K+VI+VM
Sbjct: 60  FVPHNKFPYFDFAGKHFRIGVLEKKRVIVVM 90


>ref|XP_002331152.1| predicted protein [Populus trichocarpa] gi|222873235|gb|EEF10366.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 50/93 (53%), Positives = 69/93 (74%), Gaps = 2/93 (2%)
 Frame = -2

Query: 273 KFWLLGFLLVV--STSNTITCVNGAVSKTSTRKIRKINSEGPYLGLVVPNAFEMTPLLQS 100
           K  +LGF+++V    S+T     GA+S  + ++I ++N +GPYLG+VVPN+FEM PLLQS
Sbjct: 6   KVIMLGFVILVWGVCSSTSGRAYGAISTATMQEIDRVNEKGPYLGIVVPNSFEMNPLLQS 65

Query: 99  PSFVADDKLAFLDISGRRFRIGTLETKKVIIVM 1
           PSFVAD ++ +LD  GRRFR G +E +KVIIVM
Sbjct: 66  PSFVADLEVPYLDYFGRRFRFGKVENEKVIIVM 98


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