BLASTX nr result
ID: Coptis24_contig00033472
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00033472 (304 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280745.1| PREDICTED: bark storage protein A-like [Viti... 110 9e-23 emb|CBI28039.3| unnamed protein product [Vitis vinifera] 107 1e-21 ref|XP_003528930.1| PREDICTED: bark storage protein A-like [Glyc... 102 4e-20 gb|ACU19785.1| unknown [Glycine max] 102 4e-20 ref|XP_002331152.1| predicted protein [Populus trichocarpa] gi|2... 97 1e-18 >ref|XP_002280745.1| PREDICTED: bark storage protein A-like [Vitis vinifera] Length = 338 Score = 110 bits (276), Expect = 9e-23 Identities = 56/87 (64%), Positives = 68/87 (78%) Frame = -2 Query: 261 LGFLLVVSTSNTITCVNGAVSKTSTRKIRKINSEGPYLGLVVPNAFEMTPLLQSPSFVAD 82 +GFL++V T GAVS +S +KI ++N EGPYLG+VVPN++EM PLLQSPSFVAD Sbjct: 1 MGFLVMVVVMGVGT--EGAVSVSSMKKITRVNKEGPYLGIVVPNSYEMDPLLQSPSFVAD 58 Query: 81 DKLAFLDISGRRFRIGTLETKKVIIVM 1 DK +LD +GRRFRIG LETK VIIVM Sbjct: 59 DKFPYLDFAGRRFRIGKLETKNVIIVM 85 >emb|CBI28039.3| unnamed protein product [Vitis vinifera] Length = 329 Score = 107 bits (267), Expect = 1e-21 Identities = 51/70 (72%), Positives = 60/70 (85%) Frame = -2 Query: 210 GAVSKTSTRKIRKINSEGPYLGLVVPNAFEMTPLLQSPSFVADDKLAFLDISGRRFRIGT 31 GAVS +S +KI ++N EGPYLG+VVPN++EM PLLQSPSFVADDK +LD +GRRFRIG Sbjct: 7 GAVSVSSMKKITRVNKEGPYLGIVVPNSYEMDPLLQSPSFVADDKFPYLDFAGRRFRIGK 66 Query: 30 LETKKVIIVM 1 LETK VIIVM Sbjct: 67 LETKNVIIVM 76 >ref|XP_003528930.1| PREDICTED: bark storage protein A-like [Glycine max] Length = 343 Score = 102 bits (253), Expect = 4e-20 Identities = 54/91 (59%), Positives = 69/91 (75%) Frame = -2 Query: 273 KFWLLGFLLVVSTSNTITCVNGAVSKTSTRKIRKINSEGPYLGLVVPNAFEMTPLLQSPS 94 K LLG LLV+ +TI+ NGAVS+ S R+I KIN EGPY+G+VVPNAFE+ PLL+SPS Sbjct: 2 KMKLLG-LLVLVLGSTISA-NGAVSEVSWREISKINREGPYVGIVVPNAFELNPLLRSPS 59 Query: 93 FVADDKLAFLDISGRRFRIGTLETKKVIIVM 1 FV +K + D +G+ FRIG LE K+VI+VM Sbjct: 60 FVPHNKFPYFDFAGKHFRIGVLEKKRVIVVM 90 >gb|ACU19785.1| unknown [Glycine max] Length = 233 Score = 102 bits (253), Expect = 4e-20 Identities = 54/91 (59%), Positives = 69/91 (75%) Frame = -2 Query: 273 KFWLLGFLLVVSTSNTITCVNGAVSKTSTRKIRKINSEGPYLGLVVPNAFEMTPLLQSPS 94 K LLG LLV+ +TI+ NGAVS+ S R+I KIN EGPY+G+VVPNAFE+ PLL+SPS Sbjct: 2 KMKLLG-LLVLVLGSTISA-NGAVSEVSWREISKINREGPYVGIVVPNAFELNPLLRSPS 59 Query: 93 FVADDKLAFLDISGRRFRIGTLETKKVIIVM 1 FV +K + D +G+ FRIG LE K+VI+VM Sbjct: 60 FVPHNKFPYFDFAGKHFRIGVLEKKRVIVVM 90 >ref|XP_002331152.1| predicted protein [Populus trichocarpa] gi|222873235|gb|EEF10366.1| predicted protein [Populus trichocarpa] Length = 351 Score = 97.4 bits (241), Expect = 1e-18 Identities = 50/93 (53%), Positives = 69/93 (74%), Gaps = 2/93 (2%) Frame = -2 Query: 273 KFWLLGFLLVV--STSNTITCVNGAVSKTSTRKIRKINSEGPYLGLVVPNAFEMTPLLQS 100 K +LGF+++V S+T GA+S + ++I ++N +GPYLG+VVPN+FEM PLLQS Sbjct: 6 KVIMLGFVILVWGVCSSTSGRAYGAISTATMQEIDRVNEKGPYLGIVVPNSFEMNPLLQS 65 Query: 99 PSFVADDKLAFLDISGRRFRIGTLETKKVIIVM 1 PSFVAD ++ +LD GRRFR G +E +KVIIVM Sbjct: 66 PSFVADLEVPYLDYFGRRFRFGKVENEKVIIVM 98