BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033270
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30028.3| unnamed protein product [Vitis vinifera]              118   6e-25
ref|XP_002337215.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_002279026.1| PREDICTED: non-structural maintenance of chr...   118   6e-25
ref|XP_002323286.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_003592856.1| Non-structural maintenance of chromosomes el...   107   1e-21

>emb|CBI30028.3| unnamed protein product [Vitis vinifera]
          Length = 452

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/100 (60%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
 Frame = -1

Query: 471 EVSYSHFTFRLDFKDWKLMMDSVRNGEELMPHRAQAEITNDFQGEPIPVDSQTAA-PTTP 295
           EV Y+HF FR DFKDWKLM  SV  GEELMP R    + N+ Q + +  + + AA PTTP
Sbjct: 349 EVCYNHFVFRFDFKDWKLMATSVGAGEELMPQRNSVNLPNNSQTDSVAEECEAAAAPTTP 408

Query: 294 IRKLCRNRGLVVQEESVVEDSPESNSAADKAYAIRKGKRK 175
           IRKL RNRGLV+QE++VVEDSPES+ A  +A  IRKGK K
Sbjct: 409 IRKLSRNRGLVLQEQAVVEDSPESDDAGTRAAVIRKGKGK 448


>ref|XP_002337215.1| predicted protein [Populus trichocarpa] gi|222838488|gb|EEE76853.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/102 (55%), Positives = 77/102 (75%), Gaps = 1/102 (0%)
 Frame = -1

Query: 471 EVSYSHFTFRLDFKDWKLMMDSVRNGEELMPHRAQAEITNDFQGEPIPVDSQTAAPTTPI 292
           EV+Y HF FR DFKDWKLM+ +V  GEELMP+R Q  + +D   +PIPV++Q   PTTPI
Sbjct: 14  EVAYRHFVFRFDFKDWKLMISAVEVGEELMPNRNQINMPSDSVADPIPVETQAGGPTTPI 73

Query: 291 RKLCRNRGLVVQEESVVE-DSPESNSAADKAYAIRKGKRKLQ 169
           RK  RNRGLV+QE++VVE  +PE+++   +  AI+KGKRK++
Sbjct: 74  RKFSRNRGLVLQEKTVVEVSTPENDNIQVRIPAIQKGKRKMR 115


>ref|XP_002279026.1| PREDICTED: non-structural maintenance of chromosome element 4
           [Vitis vinifera]
          Length = 380

 Score =  118 bits (295), Expect = 6e-25
 Identities = 60/100 (60%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
 Frame = -1

Query: 471 EVSYSHFTFRLDFKDWKLMMDSVRNGEELMPHRAQAEITNDFQGEPIPVDSQTAA-PTTP 295
           EV Y+HF FR DFKDWKLM  SV  GEELMP R    + N+ Q + +  + + AA PTTP
Sbjct: 277 EVCYNHFVFRFDFKDWKLMATSVGAGEELMPQRNSVNLPNNSQTDSVAEECEAAAAPTTP 336

Query: 294 IRKLCRNRGLVVQEESVVEDSPESNSAADKAYAIRKGKRK 175
           IRKL RNRGLV+QE++VVEDSPES+ A  +A  IRKGK K
Sbjct: 337 IRKLSRNRGLVLQEQAVVEDSPESDDAGTRAAVIRKGKGK 376


>ref|XP_002323286.1| predicted protein [Populus trichocarpa] gi|222867916|gb|EEF05047.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/84 (60%), Positives = 63/84 (75%)
 Frame = -1

Query: 471 EVSYSHFTFRLDFKDWKLMMDSVRNGEELMPHRAQAEITNDFQGEPIPVDSQTAAPTTPI 292
           EV+Y HF FR DFKDWKLM+ +V  GEELMP+R Q  + +D   +PIPV++Q   PTTPI
Sbjct: 229 EVAYRHFVFRFDFKDWKLMISAVEVGEELMPNRNQINMPSDSLADPIPVETQAGGPTTPI 288

Query: 291 RKLCRNRGLVVQEESVVEDSPESN 220
           RK  RNRGLV+QE++VVEDS   N
Sbjct: 289 RKFSRNRGLVLQEKTVVEDSTPEN 312


>ref|XP_003592856.1| Non-structural maintenance of chromosomes element-like protein
           [Medicago truncatula] gi|355481904|gb|AES63107.1|
           Non-structural maintenance of chromosomes element-like
           protein [Medicago truncatula]
          Length = 384

 Score =  107 bits (267), Expect = 1e-21
 Identities = 59/102 (57%), Positives = 71/102 (69%), Gaps = 2/102 (1%)
 Frame = -1

Query: 471 EVSYSHFTFRLDFKDWKLMMDSVRNGEELMPHRAQAEITNDFQGEPIPVDSQT-AAPTTP 295
           EVSY+HF FR D+KDWK+M D V +G+ELMPHR Q     D   E +  DS T A   TP
Sbjct: 282 EVSYTHFVFRYDYKDWKIMKDIVPDGKELMPHRIQYSTAADPSQEEMGGDSSTQALAVTP 341

Query: 294 IRKLCRNRGLVVQEESVVEDSPE-SNSAADKAYAIRKGKRKL 172
           IRK+ RNRG V+QEESVVE+SPE  +  A +A AIR+ KRKL
Sbjct: 342 IRKISRNRGRVLQEESVVEESPECDDENASRAAAIRRCKRKL 383