BLASTX nr result

ID: Coptis24_contig00033232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033232
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516591.1| PREDICTED: uncharacterized protein LOC100791...   102   3e-20
ref|XP_003537389.1| PREDICTED: uncharacterized protein LOC100814...   100   1e-19
ref|XP_002313831.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002880511.1| hypothetical protein ARALYDRAFT_320173 [Arab...    99   5e-19
ref|XP_002522363.1| hypothetical protein RCOM_0603420 [Ricinus c...    98   6e-19

>ref|XP_003516591.1| PREDICTED: uncharacterized protein LOC100791534 [Glycine max]
          Length = 372

 Score =  102 bits (255), Expect = 3e-20
 Identities = 47/81 (58%), Positives = 62/81 (76%), Gaps = 1/81 (1%)
 Frame = +2

Query: 2   CPVCRGICNCSLCRKAKGWPATGAISRRIAKLGFKSVAHYLIQTRRAETNSDE-IGTDDP 178
           CPVCRGICNCSLCR+AKGW  TG + ++I+ LG+KSVAHYLIQTRR+E +  +     DP
Sbjct: 212 CPVCRGICNCSLCRQAKGWAPTGPLYKKISALGYKSVAHYLIQTRRSEIDEKKNADASDP 271

Query: 179 VSTKRSLSFTNTEEVCEHNDS 241
           VS KRSL F++ ++  E N++
Sbjct: 272 VSAKRSLPFSDVDKSLEVNEN 292


>ref|XP_003537389.1| PREDICTED: uncharacterized protein LOC100814126 [Glycine max]
          Length = 374

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/81 (56%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
 Frame = +2

Query: 2   CPVCRGICNCSLCRKAKGWPATGAISRRIAKLGFKSVAHYLIQTRRAETN-SDEIGTDDP 178
           CPVCRGICNCSLCR+AKGW  TG + ++I+ LG+KSVAHYLIQTRR+E +        +P
Sbjct: 214 CPVCRGICNCSLCRQAKGWAPTGTLYKKISTLGYKSVAHYLIQTRRSEIDVKKNADPSNP 273

Query: 179 VSTKRSLSFTNTEEVCEHNDS 241
           VS KRSL F++ ++  E N++
Sbjct: 274 VSAKRSLPFSDVDKSLEVNEN 294


>ref|XP_002313831.1| predicted protein [Populus trichocarpa] gi|222850239|gb|EEE87786.1|
           predicted protein [Populus trichocarpa]
          Length = 390

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/91 (51%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
 Frame = +2

Query: 2   CPVCRGICNCSLCRKAKGWPATGAISRRIAKLGFKSVAHYLIQTRRAETNSDEIGTDDPV 181
           CPVCRGICNCSLCR AKGW  TG + R++ +LGFKSVAHYLIQTRRA+T+S++ G +  V
Sbjct: 233 CPVCRGICNCSLCRHAKGWAPTGNLYRKVIRLGFKSVAHYLIQTRRAQTHSEDSGAESLV 292

Query: 182 STKRSLSFTNT-EEVCEHNDSITSEDWQHEN 271
           S +  LS  +        N+S+ +++ +  N
Sbjct: 293 SEEGELSSADEGSRPVTCNESVNADEHRLSN 323


>ref|XP_002880511.1| hypothetical protein ARALYDRAFT_320173 [Arabidopsis lyrata subsp.
           lyrata] gi|297326350|gb|EFH56770.1| hypothetical protein
           ARALYDRAFT_320173 [Arabidopsis lyrata subsp. lyrata]
          Length = 566

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 53/96 (55%), Positives = 64/96 (66%), Gaps = 6/96 (6%)
 Frame = +2

Query: 2   CPVCRGICNCSLCRKAKGWPATGAISRRIAKLGFKSVAHYLIQTRRAETNSDEIGTDDPV 181
           CP CRGICNCSLCR  KGW  TG I RRIA LG+KSVAHYLIQT+RA+T        +  
Sbjct: 214 CPACRGICNCSLCRNNKGWVPTGPIYRRIAALGYKSVAHYLIQTKRAQTQD---AAPNQA 270

Query: 182 STKRSLSF----TNTEEV--CEHNDSITSEDWQHEN 271
           S KRSLSF     + EEV   E++DS+  E+ ++ N
Sbjct: 271 SAKRSLSFQGMIADDEEVPTLENDDSLQKEEDENTN 306


>ref|XP_002522363.1| hypothetical protein RCOM_0603420 [Ricinus communis]
           gi|223538441|gb|EEF40047.1| hypothetical protein
           RCOM_0603420 [Ricinus communis]
          Length = 680

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 47/85 (55%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2   CPVCRGICNCSLCRKAKGWPATGAISRRIAKLGFKSVAHYLIQTRRAETNSD-EIGTDDP 178
           CPVCRGICNCSLCR+ KGW  TG + R+I+ LG+KSVAHYLIQTR ++T  +  + T + 
Sbjct: 211 CPVCRGICNCSLCRQGKGWAPTGPLYRKISSLGYKSVAHYLIQTRCSKTTVEGSLPTVNQ 270

Query: 179 VSTKRSLSFTNTEEVCEHNDSITSE 253
           VS KRSL F+N E   + +  I  E
Sbjct: 271 VSAKRSLPFSNMETPSKRSHQINDE 295


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