BLASTX nr result

ID: Coptis24_contig00033060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033060
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637533.1| Disease resistance protein I-2 [Medicago tru...    90   2e-16
ref|XP_003636880.1| Disease resistance protein R3a-like protein,...    90   2e-16
ref|XP_002274507.2| PREDICTED: putative disease resistance prote...    87   1e-15
emb|CAN82719.1| hypothetical protein VITISV_004244 [Vitis vinifera]    87   1e-15
ref|XP_002336466.1| nbs-lrr resistance protein [Populus trichoca...    87   2e-15

>ref|XP_003637533.1| Disease resistance protein I-2 [Medicago truncatula]
           gi|355503468|gb|AES84671.1| Disease resistance protein
           I-2 [Medicago truncatula]
          Length = 833

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 47/77 (61%), Positives = 56/77 (72%)
 Frame = +2

Query: 59  LRAMTLKLSKITRLPDSIGNLKHLRYLNLSWTDITSLPESICGLRNMQTLKLVMCHNLRM 238
           LR +TL  +    LPDSIG LKHLR L +S T+IT LPESIC L N+QTLKLV C+NL  
Sbjct: 321 LRVLTLVGAYFYSLPDSIGELKHLRSLEVSDTEITRLPESICSLYNLQTLKLVGCYNLIE 380

Query: 239 LPKDLRNMSRLRHLDIR 289
           LPKD+  +  LR+LDIR
Sbjct: 381 LPKDIHKLVNLRYLDIR 397


>ref|XP_003636880.1| Disease resistance protein R3a-like protein, partial [Medicago
           truncatula] gi|355502815|gb|AES84018.1| Disease
           resistance protein R3a-like protein, partial [Medicago
           truncatula]
          Length = 641

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 47/77 (61%), Positives = 56/77 (72%)
 Frame = +2

Query: 59  LRAMTLKLSKITRLPDSIGNLKHLRYLNLSWTDITSLPESICGLRNMQTLKLVMCHNLRM 238
           LR +TL  +    LPDSIG LKHLR L +S T+IT LPESIC L N+QTLKLV C+NL  
Sbjct: 129 LRVLTLVGAYFYSLPDSIGELKHLRSLEVSDTEITRLPESICSLYNLQTLKLVGCYNLIE 188

Query: 239 LPKDLRNMSRLRHLDIR 289
           LPKD+  +  LR+LDIR
Sbjct: 189 LPKDIHKLVNLRYLDIR 205


>ref|XP_002274507.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 1263

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
 Frame = +2

Query: 14  GYKKNVDFD----FSRFTSLRAMTLKLSKITRLPDSIGNLKHLRYLNLSWTDITSLPESI 181
           GY KN+       F   T +R + L  S I+ +P+SI  L+ LRYL+LS T+IT LP+S+
Sbjct: 552 GYLKNIGSSLEKMFQALTCIRVLDLSSSTISIVPESIDQLELLRYLDLSKTEITRLPDSL 611

Query: 182 CGLRNMQTLKLVMCHNLRMLPKDLRNMSRLRHLDIRE 292
           C L N+QTLKL+ C +L  LPKD  N+  LRHL++ E
Sbjct: 612 CNLYNLQTLKLLGCLSLSQLPKDFANLINLRHLELDE 648


>emb|CAN82719.1| hypothetical protein VITISV_004244 [Vitis vinifera]
          Length = 1521

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
 Frame = +2

Query: 14  GYKKNVDFD----FSRFTSLRAMTLKLSKITRLPDSIGNLKHLRYLNLSWTDITSLPESI 181
           GY KN+       F   T +R + L  S I+ +P+SI  L+ LRYL+LS T+IT LP+S+
Sbjct: 531 GYLKNIGSSLEKMFQALTCIRVLDLSSSTISIVPESIDQLELLRYLDLSKTEITRLPDSL 590

Query: 182 CGLRNMQTLKLVMCHNLRMLPKDLRNMSRLRHLDIRE 292
           C L N+QTLKL+ C +L  LPKD  N+  LRHL++ E
Sbjct: 591 CNLYNLQTLKLLGCLSLSQLPKDFANLINLRHLELDE 627


>ref|XP_002336466.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222835078|gb|EEE73527.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 1009

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 44/85 (51%), Positives = 60/85 (70%)
 Frame = +2

Query: 26  NVDFDFSRFTSLRAMTLKLSKITRLPDSIGNLKHLRYLNLSWTDITSLPESICGLRNMQT 205
           NV   F +F SLR + LKLS  T+LPDSI  L+HLRYL++S T+I + PESI  L +++T
Sbjct: 523 NVLNGFWKFKSLRTLKLKLSDTTKLPDSICKLRHLRYLDVSCTNIRAFPESITKLYHLET 582

Query: 206 LKLVMCHNLRMLPKDLRNMSRLRHL 280
           L+ + C +L  LPK +RN+  LRHL
Sbjct: 583 LRFIDCKSLEKLPKKIRNLISLRHL 607


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