BLASTX nr result
ID: Coptis24_contig00033060
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00033060 (292 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003637533.1| Disease resistance protein I-2 [Medicago tru... 90 2e-16 ref|XP_003636880.1| Disease resistance protein R3a-like protein,... 90 2e-16 ref|XP_002274507.2| PREDICTED: putative disease resistance prote... 87 1e-15 emb|CAN82719.1| hypothetical protein VITISV_004244 [Vitis vinifera] 87 1e-15 ref|XP_002336466.1| nbs-lrr resistance protein [Populus trichoca... 87 2e-15 >ref|XP_003637533.1| Disease resistance protein I-2 [Medicago truncatula] gi|355503468|gb|AES84671.1| Disease resistance protein I-2 [Medicago truncatula] Length = 833 Score = 90.1 bits (222), Expect = 2e-16 Identities = 47/77 (61%), Positives = 56/77 (72%) Frame = +2 Query: 59 LRAMTLKLSKITRLPDSIGNLKHLRYLNLSWTDITSLPESICGLRNMQTLKLVMCHNLRM 238 LR +TL + LPDSIG LKHLR L +S T+IT LPESIC L N+QTLKLV C+NL Sbjct: 321 LRVLTLVGAYFYSLPDSIGELKHLRSLEVSDTEITRLPESICSLYNLQTLKLVGCYNLIE 380 Query: 239 LPKDLRNMSRLRHLDIR 289 LPKD+ + LR+LDIR Sbjct: 381 LPKDIHKLVNLRYLDIR 397 >ref|XP_003636880.1| Disease resistance protein R3a-like protein, partial [Medicago truncatula] gi|355502815|gb|AES84018.1| Disease resistance protein R3a-like protein, partial [Medicago truncatula] Length = 641 Score = 90.1 bits (222), Expect = 2e-16 Identities = 47/77 (61%), Positives = 56/77 (72%) Frame = +2 Query: 59 LRAMTLKLSKITRLPDSIGNLKHLRYLNLSWTDITSLPESICGLRNMQTLKLVMCHNLRM 238 LR +TL + LPDSIG LKHLR L +S T+IT LPESIC L N+QTLKLV C+NL Sbjct: 129 LRVLTLVGAYFYSLPDSIGELKHLRSLEVSDTEITRLPESICSLYNLQTLKLVGCYNLIE 188 Query: 239 LPKDLRNMSRLRHLDIR 289 LPKD+ + LR+LDIR Sbjct: 189 LPKDIHKLVNLRYLDIR 205 >ref|XP_002274507.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis vinifera] Length = 1263 Score = 87.4 bits (215), Expect = 1e-15 Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 4/97 (4%) Frame = +2 Query: 14 GYKKNVDFD----FSRFTSLRAMTLKLSKITRLPDSIGNLKHLRYLNLSWTDITSLPESI 181 GY KN+ F T +R + L S I+ +P+SI L+ LRYL+LS T+IT LP+S+ Sbjct: 552 GYLKNIGSSLEKMFQALTCIRVLDLSSSTISIVPESIDQLELLRYLDLSKTEITRLPDSL 611 Query: 182 CGLRNMQTLKLVMCHNLRMLPKDLRNMSRLRHLDIRE 292 C L N+QTLKL+ C +L LPKD N+ LRHL++ E Sbjct: 612 CNLYNLQTLKLLGCLSLSQLPKDFANLINLRHLELDE 648 >emb|CAN82719.1| hypothetical protein VITISV_004244 [Vitis vinifera] Length = 1521 Score = 87.4 bits (215), Expect = 1e-15 Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 4/97 (4%) Frame = +2 Query: 14 GYKKNVDFD----FSRFTSLRAMTLKLSKITRLPDSIGNLKHLRYLNLSWTDITSLPESI 181 GY KN+ F T +R + L S I+ +P+SI L+ LRYL+LS T+IT LP+S+ Sbjct: 531 GYLKNIGSSLEKMFQALTCIRVLDLSSSTISIVPESIDQLELLRYLDLSKTEITRLPDSL 590 Query: 182 CGLRNMQTLKLVMCHNLRMLPKDLRNMSRLRHLDIRE 292 C L N+QTLKL+ C +L LPKD N+ LRHL++ E Sbjct: 591 CNLYNLQTLKLLGCLSLSQLPKDFANLINLRHLELDE 627 >ref|XP_002336466.1| nbs-lrr resistance protein [Populus trichocarpa] gi|222835078|gb|EEE73527.1| nbs-lrr resistance protein [Populus trichocarpa] Length = 1009 Score = 86.7 bits (213), Expect = 2e-15 Identities = 44/85 (51%), Positives = 60/85 (70%) Frame = +2 Query: 26 NVDFDFSRFTSLRAMTLKLSKITRLPDSIGNLKHLRYLNLSWTDITSLPESICGLRNMQT 205 NV F +F SLR + LKLS T+LPDSI L+HLRYL++S T+I + PESI L +++T Sbjct: 523 NVLNGFWKFKSLRTLKLKLSDTTKLPDSICKLRHLRYLDVSCTNIRAFPESITKLYHLET 582 Query: 206 LKLVMCHNLRMLPKDLRNMSRLRHL 280 L+ + C +L LPK +RN+ LRHL Sbjct: 583 LRFIDCKSLEKLPKKIRNLISLRHL 607