BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033037
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD97617.1| rubisco activase (chloroplast) [Ammopiptanthus mo...   159   3e-37
ref|XP_003616450.1| Ribulose-1 5-bisphosphate carboxylase/oxygen...   158   5e-37
ref|XP_003632187.1| PREDICTED: ribulose bisphosphate carboxylase...   156   2e-36
ref|XP_002282236.1| PREDICTED: ribulose bisphosphate carboxylase...   156   2e-36
emb|CAN83893.1| hypothetical protein VITISV_039112 [Vitis vinifera]   156   2e-36

>gb|AFD97617.1| rubisco activase (chloroplast) [Ammopiptanthus mongolicus]
          Length = 439

 Score =  159 bits (401), Expect = 3e-37
 Identities = 75/87 (86%), Positives = 81/87 (93%)
 Frame = -2

Query: 263 KVSSGSFKIVAAEIDEDKQTEKDRWKGLAYDISDDQQDITRGKGMVDSLFQAPQQAGTHY 84
           KVSSGSFK+VAAEID+ KQT+KDRWKG AYDISDDQQDITRGKGMVDSLFQAP  AGTHY
Sbjct: 49  KVSSGSFKVVAAEIDDSKQTDKDRWKGPAYDISDDQQDITRGKGMVDSLFQAPSDAGTHY 108

Query: 83  AVMSSYEYISTGLREYNLDNTMDGLYM 3
           AV+SSYEYISTGLREYNLDN +DG Y+
Sbjct: 109 AVLSSYEYISTGLREYNLDNNVDGFYI 135


>ref|XP_003616450.1| Ribulose-1 5-bisphosphate carboxylase/oxygenase activase [Medicago
           truncatula] gi|355517785|gb|AES99408.1| Ribulose-1
           5-bisphosphate carboxylase/oxygenase activase [Medicago
           truncatula]
          Length = 476

 Score =  158 bits (399), Expect = 5e-37
 Identities = 74/87 (85%), Positives = 82/87 (94%)
 Frame = -2

Query: 263 KVSSGSFKIVAAEIDEDKQTEKDRWKGLAYDISDDQQDITRGKGMVDSLFQAPQQAGTHY 84
           KVSSG FKIVAAEI+E KQT+KDRW+GLAYD SDDQQDITRGKGMVD++FQAPQ +GTHY
Sbjct: 48  KVSSGRFKIVAAEINESKQTDKDRWRGLAYDTSDDQQDITRGKGMVDTVFQAPQDSGTHY 107

Query: 83  AVMSSYEYISTGLREYNLDNTMDGLYM 3
           AVMSSYEYISTGLR+YNLDNTMDG Y+
Sbjct: 108 AVMSSYEYISTGLRQYNLDNTMDGFYI 134


>ref|XP_003632187.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 2,
           chloroplastic isoform 2 [Vitis vinifera]
          Length = 440

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/87 (83%), Positives = 83/87 (95%)
 Frame = -2

Query: 263 KVSSGSFKIVAAEIDEDKQTEKDRWKGLAYDISDDQQDITRGKGMVDSLFQAPQQAGTHY 84
           K++SGSFK+VA EIDE++QTEKDRWKGLAYD+SDDQQDITRGKGMVDSLFQAP Q+GTHY
Sbjct: 48  KIASGSFKVVA-EIDENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHY 106

Query: 83  AVMSSYEYISTGLREYNLDNTMDGLYM 3
           AVMSSYEY+STGLR+YNLDN MDG Y+
Sbjct: 107 AVMSSYEYLSTGLRQYNLDNNMDGFYI 133


>ref|XP_002282236.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 2,
           chloroplastic isoform 1 [Vitis vinifera]
           gi|297746032|emb|CBI16088.3| unnamed protein product
           [Vitis vinifera]
          Length = 472

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/87 (83%), Positives = 83/87 (95%)
 Frame = -2

Query: 263 KVSSGSFKIVAAEIDEDKQTEKDRWKGLAYDISDDQQDITRGKGMVDSLFQAPQQAGTHY 84
           K++SGSFK+VA EIDE++QTEKDRWKGLAYD+SDDQQDITRGKGMVDSLFQAP Q+GTHY
Sbjct: 48  KIASGSFKVVA-EIDENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHY 106

Query: 83  AVMSSYEYISTGLREYNLDNTMDGLYM 3
           AVMSSYEY+STGLR+YNLDN MDG Y+
Sbjct: 107 AVMSSYEYLSTGLRQYNLDNNMDGFYI 133


>emb|CAN83893.1| hypothetical protein VITISV_039112 [Vitis vinifera]
          Length = 472

 Score =  156 bits (394), Expect = 2e-36
 Identities = 73/87 (83%), Positives = 83/87 (95%)
 Frame = -2

Query: 263 KVSSGSFKIVAAEIDEDKQTEKDRWKGLAYDISDDQQDITRGKGMVDSLFQAPQQAGTHY 84
           K++SGSFK+VA EIDE++QTEKDRWKGLAYD+SDDQQDITRGKGMVDSLFQAP Q+GTHY
Sbjct: 48  KIASGSFKVVA-EIDENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHY 106

Query: 83  AVMSSYEYISTGLREYNLDNTMDGLYM 3
           AVMSSYEY+STGLR+YNLDN MDG Y+
Sbjct: 107 AVMSSYEYLSTGLRQYNLDNNMDGFYI 133