BLASTX nr result

ID: Coptis24_contig00033030 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033030
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313382.1| predicted protein [Populus trichocarpa] gi|2...   167   6e-40
ref|XP_002277965.1| PREDICTED: uncharacterized protein LOC100257...   162   3e-38
ref|XP_002525638.1| conserved hypothetical protein [Ricinus comm...   152   2e-35
ref|XP_003552956.1| PREDICTED: uncharacterized protein C757.02c-...   150   8e-35
ref|XP_003539290.1| PREDICTED: uncharacterized protein C757.02c-...   146   1e-33

>ref|XP_002313382.1| predicted protein [Populus trichocarpa] gi|222849790|gb|EEE87337.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  167 bits (424), Expect = 6e-40
 Identities = 73/104 (70%), Positives = 85/104 (81%)
 Frame = +3

Query: 3   LILGSSRRTIYNVMGCLGVYGTICKHLNLPFVFGGTRECWEEVYVDGSDARLVAEQHIWA 182
           L+ GSS   +YN+MGCL +YG ICKHLNLPFVFGGTRECWEEV++DGSDARLVAEQHIWA
Sbjct: 189 LLTGSSNTALYNIMGCLAIYGAICKHLNLPFVFGGTRECWEEVFIDGSDARLVAEQHIWA 248

Query: 183 STNYDASSKEGRAFNAINGTRFTWKEIWPALAIKFGVDTSDNMF 314
           +T+   SS +G+AFNAING  FTWKEIWP L  KFG +  + MF
Sbjct: 249 ATDDGISSTDGQAFNAINGPSFTWKEIWPVLGKKFGAEVPEEMF 292


>ref|XP_002277965.1| PREDICTED: uncharacterized protein LOC100257108 [Vitis vinifera]
          Length = 374

 Score =  162 bits (409), Expect = 3e-38
 Identities = 73/104 (70%), Positives = 86/104 (82%)
 Frame = +3

Query: 3   LILGSSRRTIYNVMGCLGVYGTICKHLNLPFVFGGTRECWEEVYVDGSDARLVAEQHIWA 182
           LI+GSS+R+++N MG L VYG ICKHLNLPFVFGG RE WEE YVDGSDARLVAEQHIWA
Sbjct: 185 LIMGSSQRSVFNFMGSLCVYGAICKHLNLPFVFGGMRESWEEAYVDGSDARLVAEQHIWA 244

Query: 183 STNYDASSKEGRAFNAINGTRFTWKEIWPALAIKFGVDTSDNMF 314
           +TN +    +G+AFNAINGT FTWKEIWPA+ +K GV+   +MF
Sbjct: 245 ATNEEIYPTDGQAFNAINGTGFTWKEIWPAVGLKLGVEVPQDMF 288


>ref|XP_002525638.1| conserved hypothetical protein [Ricinus communis]
           gi|223535074|gb|EEF36756.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/104 (68%), Positives = 82/104 (78%)
 Frame = +3

Query: 3   LILGSSRRTIYNVMGCLGVYGTICKHLNLPFVFGGTRECWEEVYVDGSDARLVAEQHIWA 182
           L++GSS RT+YNVMG L VYG ICK+L+L FVFGGT ECWEE  +DGSDARLVAEQHIWA
Sbjct: 190 LLMGSSNRTMYNVMGSLCVYGAICKYLHLAFVFGGTMECWEEACIDGSDARLVAEQHIWA 249

Query: 183 STNYDASSKEGRAFNAINGTRFTWKEIWPALAIKFGVDTSDNMF 314
           +TN + SS  G+AFNAING  FTWKEIWP L  K  V+   +MF
Sbjct: 250 ATNGEISSTSGQAFNAINGPSFTWKEIWPILGKKLEVEMPQDMF 293


>ref|XP_003552956.1| PREDICTED: uncharacterized protein C757.02c-like [Glycine max]
          Length = 377

 Score =  150 bits (380), Expect = 8e-35
 Identities = 69/103 (66%), Positives = 79/103 (76%)
 Frame = +3

Query: 3   LILGSSRRTIYNVMGCLGVYGTICKHLNLPFVFGGTRECWEEVYVDGSDARLVAEQHIWA 182
           L+ GSS R+ YN MG L VYG ICKHL LPFVFGGTR+CWEE Y+DGSDARLVA+QHIWA
Sbjct: 188 LLFGSSVRSFYNFMGSLCVYGAICKHLRLPFVFGGTRKCWEESYIDGSDARLVADQHIWA 247

Query: 183 STNYDASSKEGRAFNAINGTRFTWKEIWPALAIKFGVDTSDNM 311
           +TN D  S  G+AFN+ING  FTWKEIWP +  K GV    +M
Sbjct: 248 ATNGDIISINGQAFNSINGPSFTWKEIWPIVGKKMGVQVPQDM 290


>ref|XP_003539290.1| PREDICTED: uncharacterized protein C757.02c-like [Glycine max]
          Length = 366

 Score =  146 bits (369), Expect = 1e-33
 Identities = 67/103 (65%), Positives = 76/103 (73%)
 Frame = +3

Query: 3   LILGSSRRTIYNVMGCLGVYGTICKHLNLPFVFGGTRECWEEVYVDGSDARLVAEQHIWA 182
           L+ GSS R+ YN MG L VYG ICKHL LPFVFGGTR+CWEE Y+DGSDARLVA+QHIWA
Sbjct: 190 LLFGSSVRSFYNFMGSLCVYGAICKHLRLPFVFGGTRKCWEESYIDGSDARLVADQHIWA 249

Query: 183 STNYDASSKEGRAFNAINGTRFTWKEIWPALAIKFGVDTSDNM 311
           + N D  S  G+AFN+ING  FTWKEIWP +  K  V     M
Sbjct: 250 AKNSDMISTNGQAFNSINGPSFTWKEIWPIIGKKLEVQVPQEM 292


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