BLASTX nr result

ID: Coptis24_contig00032999 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032999
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004173442.1| PREDICTED: ABC transporter B family member 1...   149   2e-34
ref|XP_004137839.1| PREDICTED: ABC transporter B family member 1...   148   5e-34
ref|XP_002323485.1| multidrug/pheromone exporter, MDR family, AB...   147   1e-33
ref|XP_003535149.1| PREDICTED: ABC transporter B family member 1...   146   2e-33
ref|XP_003554390.1| PREDICTED: ABC transporter B family member 1...   146   2e-33

>ref|XP_004173442.1| PREDICTED: ABC transporter B family member 1-like, partial [Cucumis
           sativus]
          Length = 699

 Score =  149 bits (376), Expect = 2e-34
 Identities = 77/82 (93%), Positives = 80/82 (97%)
 Frame = +3

Query: 3   TSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFA 182
           TSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFA
Sbjct: 215 TSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFA 274

Query: 183 KGDSSVYAKLIRMQEMAHENAI 248
           KG++ VYAKLIRMQEMAHE A+
Sbjct: 275 KGENGVYAKLIRMQEMAHETAL 296


>ref|XP_004137839.1| PREDICTED: ABC transporter B family member 1-like [Cucumis sativus]
          Length = 1361

 Score =  148 bits (373), Expect = 5e-34
 Identities = 76/82 (92%), Positives = 80/82 (97%)
 Frame = +3

Query: 3   TSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFA 182
           TSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSE+GTHDELFA
Sbjct: 605 TSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEMGTHDELFA 664

Query: 183 KGDSSVYAKLIRMQEMAHENAI 248
           KG++ VYAKLIRMQEMAHE A+
Sbjct: 665 KGENGVYAKLIRMQEMAHETAL 686



 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 43/82 (52%), Positives = 56/82 (68%)
 Frame = +3

Query: 3    TSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFA 182
            TSALD+ESE+ VQEALDR   G+TT+V+AHRLSTIR A ++AV+  G VSE G+H  L  
Sbjct: 1260 TSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNAHVIAVIDDGKVSEQGSHSHLLK 1319

Query: 183  KGDSSVYAKLIRMQEMAHENAI 248
                  YA++I++Q   H   I
Sbjct: 1320 NYPDGCYARMIQLQRFTHSQVI 1341


>ref|XP_002323485.1| multidrug/pheromone exporter, MDR family, ABC transporter family
           [Populus trichocarpa] gi|222868115|gb|EEF05246.1|
           multidrug/pheromone exporter, MDR family, ABC
           transporter family [Populus trichocarpa]
          Length = 1324

 Score =  147 bits (370), Expect = 1e-33
 Identities = 76/82 (92%), Positives = 79/82 (96%)
 Frame = +3

Query: 3   TSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFA 182
           TSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDEL A
Sbjct: 568 TSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELIA 627

Query: 183 KGDSSVYAKLIRMQEMAHENAI 248
           KG++ VYAKLIRMQEMAHE A+
Sbjct: 628 KGENGVYAKLIRMQEMAHETAL 649



 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 41/82 (50%), Positives = 57/82 (69%)
 Frame = +3

Query: 3    TSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFA 182
            TSALD+ESE+ VQEALDR   G+TT+V+AHRLSTIR A+++AV+  G V+E G+H  L  
Sbjct: 1223 TSALDAESERSVQEALDRACSGKTTIVVAHRLSTIRNANVIAVIDDGKVAEQGSHSHLLK 1282

Query: 183  KGDSSVYAKLIRMQEMAHENAI 248
                  YA++I++Q   H   +
Sbjct: 1283 NYPDGSYARMIQLQRFTHSQVV 1304


>ref|XP_003535149.1| PREDICTED: ABC transporter B family member 1-like [Glycine max]
          Length = 1343

 Score =  146 bits (369), Expect = 2e-33
 Identities = 75/82 (91%), Positives = 80/82 (97%)
 Frame = +3

Query: 3   TSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFA 182
           TSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSV+EIGTHDELFA
Sbjct: 588 TSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVTEIGTHDELFA 647

Query: 183 KGDSSVYAKLIRMQEMAHENAI 248
           KG++ VYAKLIRMQEMAHE ++
Sbjct: 648 KGENGVYAKLIRMQEMAHETSM 669



 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 41/82 (50%), Positives = 58/82 (70%)
 Frame = +3

Query: 3    TSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFA 182
            TSALD+ESE+ VQEALDR   G+TT+++AHRLSTIR A+L+AV+  G V+E G+H  L  
Sbjct: 1243 TSALDAESERSVQEALDRACSGKTTIIVAHRLSTIRNANLIAVIDDGKVAEQGSHSLLLK 1302

Query: 183  KGDSSVYAKLIRMQEMAHENAI 248
                 +YA++I++Q   +   I
Sbjct: 1303 NYPDGIYARMIQLQRFTNNQVI 1324


>ref|XP_003554390.1| PREDICTED: ABC transporter B family member 1-like isoform 2
           [Glycine max]
          Length = 1324

 Score =  146 bits (368), Expect = 2e-33
 Identities = 74/82 (90%), Positives = 80/82 (97%)
 Frame = +3

Query: 3   TSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFA 182
           TSALDSESEKLVQEALDRFMIGRTTL+IAHRLSTIRKADLVAVLQQGSVSEIGTHDELF+
Sbjct: 584 TSALDSESEKLVQEALDRFMIGRTTLIIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFS 643

Query: 183 KGDSSVYAKLIRMQEMAHENAI 248
           KG++ VYAKLI+MQEMAHE A+
Sbjct: 644 KGENGVYAKLIKMQEMAHETAM 665



 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 42/82 (51%), Positives = 59/82 (71%)
 Frame = +3

Query: 3    TSALDSESEKLVQEALDRFMIGRTTLVIAHRLSTIRKADLVAVLQQGSVSEIGTHDELFA 182
            TSALD+ESE+ VQEALDR   G+TT+++AHRLSTIR A+L+AV+  G V+E G+H +L  
Sbjct: 1224 TSALDAESERSVQEALDRASSGKTTIIVAHRLSTIRNANLIAVIDDGKVAEQGSHSQLLK 1283

Query: 183  KGDSSVYAKLIRMQEMAHENAI 248
                 +YA++I++Q   H   I
Sbjct: 1284 NHPDGIYARMIQLQRFTHSQVI 1305


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