BLASTX nr result

ID: Coptis24_contig00032993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032993
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264211.2| PREDICTED: probable receptor-like protein ki...   175   4e-42
emb|CBI31024.3| unnamed protein product [Vitis vinifera]              175   4e-42
ref|XP_002330599.1| predicted protein [Populus trichocarpa] gi|2...   154   5e-36
emb|CAN73534.1| hypothetical protein VITISV_041657 [Vitis vinifera]   153   1e-35
ref|XP_002299052.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35

>ref|XP_002264211.2| PREDICTED: probable receptor-like protein kinase At1g30570-like
           [Vitis vinifera]
          Length = 850

 Score =  175 bits (443), Expect = 4e-42
 Identities = 88/142 (61%), Positives = 106/142 (74%)
 Frame = -3

Query: 426 FTVVANNLRLVSQFNVPEEVSRKNSYLKAMGSNNSSSSLMKEYFLSVDSGELVIDVIPDN 247
           F+V AN L+L SQ NVP E+S KNSYL++ GSN+SS S++KEYFL+VDSG LVI+  P  
Sbjct: 125 FSVTANGLKLASQLNVPGEISHKNSYLQSSGSNSSSFSMIKEYFLTVDSGLLVIEFAPTK 184

Query: 246 GKFAFVNAIEIVPVLGRLFVDSVAKVGGNGAENSLNLGELGIETMYRLNVGGPNIKPDRD 67
           G F F+NAIEIVPV+  LF  SV+KVG  G  + LNL   GIE MYRLNVGGP I PD+D
Sbjct: 185 GSFGFINAIEIVPVVDNLFFSSVSKVG--GTNSVLNLSGRGIEAMYRLNVGGPEITPDQD 242

Query: 66  QDLWRMWESDLVYMFTSYAGTE 1
            DLWR W+ D  YMFT+ AG+E
Sbjct: 243 LDLWRTWDVDSSYMFTANAGSE 264


>emb|CBI31024.3| unnamed protein product [Vitis vinifera]
          Length = 844

 Score =  175 bits (443), Expect = 4e-42
 Identities = 88/142 (61%), Positives = 106/142 (74%)
 Frame = -3

Query: 426 FTVVANNLRLVSQFNVPEEVSRKNSYLKAMGSNNSSSSLMKEYFLSVDSGELVIDVIPDN 247
           F+V AN L+L SQ NVP E+S KNSYL++ GSN+SS S++KEYFL+VDSG LVI+  P  
Sbjct: 119 FSVTANGLKLASQLNVPGEISHKNSYLQSSGSNSSSFSMIKEYFLTVDSGLLVIEFAPTK 178

Query: 246 GKFAFVNAIEIVPVLGRLFVDSVAKVGGNGAENSLNLGELGIETMYRLNVGGPNIKPDRD 67
           G F F+NAIEIVPV+  LF  SV+KVG  G  + LNL   GIE MYRLNVGGP I PD+D
Sbjct: 179 GSFGFINAIEIVPVVDNLFFSSVSKVG--GTNSVLNLSGRGIEAMYRLNVGGPEITPDQD 236

Query: 66  QDLWRMWESDLVYMFTSYAGTE 1
            DLWR W+ D  YMFT+ AG+E
Sbjct: 237 LDLWRTWDVDSSYMFTANAGSE 258


>ref|XP_002330599.1| predicted protein [Populus trichocarpa] gi|222872157|gb|EEF09288.1|
           predicted protein [Populus trichocarpa]
          Length = 836

 Score =  154 bits (390), Expect = 5e-36
 Identities = 77/142 (54%), Positives = 104/142 (73%)
 Frame = -3

Query: 426 FTVVANNLRLVSQFNVPEEVSRKNSYLKAMGSNNSSSSLMKEYFLSVDSGELVIDVIPDN 247
           F+VVAN L+L+++FNVP E+S KN +L+   SN+SS SL+KEY L+++   LV++ +   
Sbjct: 124 FSVVANGLKLMTEFNVPVEISDKNLHLQNSNSNSSSLSLVKEYILTIND-VLVVEFVSSR 182

Query: 246 GKFAFVNAIEIVPVLGRLFVDSVAKVGGNGAENSLNLGELGIETMYRLNVGGPNIKPDRD 67
           G F F+NAIE+VPV+G LF DSV+KVGG+ A  + N+   GIETMYRLN+GG  IK ++D
Sbjct: 183 GSFGFINAIEVVPVVGTLFADSVSKVGGSNA--NFNVSGRGIETMYRLNIGGQEIKTNQD 240

Query: 66  QDLWRMWESDLVYMFTSYAGTE 1
            DLWR WE D  YM T+ AG E
Sbjct: 241 SDLWRKWEMDSSYMITADAGVE 262


>emb|CAN73534.1| hypothetical protein VITISV_041657 [Vitis vinifera]
          Length = 802

 Score =  153 bits (387), Expect = 1e-35
 Identities = 77/123 (62%), Positives = 92/123 (74%)
 Frame = -3

Query: 369 VSRKNSYLKAMGSNNSSSSLMKEYFLSVDSGELVIDVIPDNGKFAFVNAIEIVPVLGRLF 190
           +S KNSYL++ GSN+SS S++KEYFL+VDSG LVI+  P  G F F+NAIEIVPV+  LF
Sbjct: 96  ISHKNSYLQSSGSNSSSXSMIKEYFLTVDSGLLVIEFAPTKGSFGFINAIEIVPVVDNLF 155

Query: 189 VDSVAKVGGNGAENSLNLGELGIETMYRLNVGGPNIKPDRDQDLWRMWESDLVYMFTSYA 10
             SV+KVG  G  + LNL   GIE MYRLNVGGP I PD+D DLWR WE D  YMFT+ A
Sbjct: 156 FSSVSKVG--GTNSVLNLSGRGIEAMYRLNVGGPEITPDQDLDLWRTWEVDSSYMFTANA 213

Query: 9   GTE 1
           G+E
Sbjct: 214 GSE 216


>ref|XP_002299052.1| predicted protein [Populus trichocarpa] gi|222846310|gb|EEE83857.1|
           predicted protein [Populus trichocarpa]
          Length = 840

 Score =  152 bits (385), Expect = 2e-35
 Identities = 80/143 (55%), Positives = 101/143 (70%)
 Frame = -3

Query: 429 LFTVVANNLRLVSQFNVPEEVSRKNSYLKAMGSNNSSSSLMKEYFLSVDSGELVIDVIPD 250
           LF+VVAN L+L++ FNVP E+S K   L+   SN+SS SL+KEY L+++   LV++ IP 
Sbjct: 120 LFSVVANGLKLLADFNVPGEISDKYLPLQNSNSNSSSLSLVKEYILAIND-VLVVEFIPS 178

Query: 249 NGKFAFVNAIEIVPVLGRLFVDSVAKVGGNGAENSLNLGELGIETMYRLNVGGPNIKPDR 70
            G F F+NA+EIVPV+G LF D V +VGG+ A    N+   GIETMYRLNVGG  IKPD+
Sbjct: 179 KGSFGFINAMEIVPVIGTLFADLVRRVGGSDA----NVSGRGIETMYRLNVGGQEIKPDQ 234

Query: 69  DQDLWRMWESDLVYMFTSYAGTE 1
           D DLWR WE D  YM T+ AG E
Sbjct: 235 DSDLWRKWEVDSSYMITADAGVE 257


Top