BLASTX nr result

ID: Coptis24_contig00032987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032987
         (525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314895.1| white-brown-complex ABC transporter family [...   261   4e-68
ref|XP_003631190.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   257   8e-67
emb|CBI27088.3| unnamed protein product [Vitis vinifera]              257   8e-67
emb|CAN62390.1| hypothetical protein VITISV_039480 [Vitis vinifera]   257   8e-67
ref|XP_002524381.1| ATP-binding cassette transporter, putative [...   255   2e-66

>ref|XP_002314895.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222863935|gb|EEF01066.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 683

 Score =  261 bits (667), Expect = 4e-68
 Identities = 126/169 (74%), Positives = 141/169 (83%)
 Frame = +3

Query: 3   AIFTFPQERPMLIKERSSGMYRLSSYYFARIAGDLPMELVLPTISVAITYWMSGLKPSXX 182
           AIF FPQERPMLIKERSSGMYRLSSYYFAR+AGDLPMELV+PTI V +TYWM GLKPS  
Sbjct: 486 AIFAFPQERPMLIKERSSGMYRLSSYYFARMAGDLPMELVMPTIFVTVTYWMGGLKPSLI 545

Query: 183 XXXXXXXXXXXXXXXSQGLGLALGAVIMDVKQATTLASVTMLIFLLAGGYYIQHIPSFIA 362
                          SQGLGLALGA++MDVKQATTLASVTML+FLLAGGYYIQHIP FIA
Sbjct: 546 TFVLTLLVILFNVLVSQGLGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQHIPPFIA 605

Query: 363 WLKYISFSHYCYKLLIGVQYSDTDYYVCGAGVRCKVLEFPAIQHLGLDS 509
           WLKYISFSHYCYKLL+GVQYS T+ Y CG  + C+V++FPAI++LGLD+
Sbjct: 606 WLKYISFSHYCYKLLVGVQYSATEVYDCGLQMHCRVMDFPAIKYLGLDN 654


>ref|XP_003631190.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter G family member
           21-like [Vitis vinifera]
          Length = 677

 Score =  257 bits (656), Expect = 8e-67
 Identities = 125/168 (74%), Positives = 137/168 (81%)
 Frame = +3

Query: 3   AIFTFPQERPMLIKERSSGMYRLSSYYFARIAGDLPMELVLPTISVAITYWMSGLKPSXX 182
           AIFTFPQERPMLI+ERSSGMYRLSSYYFAR+AGDLPMELVLPTI V I YWM GLKPS  
Sbjct: 480 AIFTFPQERPMLIRERSSGMYRLSSYYFARMAGDLPMELVLPTIFVTIAYWMGGLKPSLL 539

Query: 183 XXXXXXXXXXXXXXXSQGLGLALGAVIMDVKQATTLASVTMLIFLLAGGYYIQHIPSFIA 362
                          SQGLGLALGA+IMDVKQ T LASVTML+FLLAGGYYIQHIP FIA
Sbjct: 540 TFVLTLLVILYNVLVSQGLGLALGAIIMDVKQGTALASVTMLVFLLAGGYYIQHIPPFIA 599

Query: 363 WLKYISFSHYCYKLLIGVQYSDTDYYVCGAGVRCKVLEFPAIQHLGLD 506
           WLKYISFSHYCYKLL+GVQY++ + Y CG  + CKV EFPAI++LG+D
Sbjct: 600 WLKYISFSHYCYKLLVGVQYAENEVYECGLRMHCKVWEFPAIKYLGID 647


>emb|CBI27088.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  257 bits (656), Expect = 8e-67
 Identities = 125/168 (74%), Positives = 137/168 (81%)
 Frame = +3

Query: 3   AIFTFPQERPMLIKERSSGMYRLSSYYFARIAGDLPMELVLPTISVAITYWMSGLKPSXX 182
           AIFTFPQERPMLI+ERSSGMYRLSSYYFAR+AGDLPMELVLPTI V I YWM GLKPS  
Sbjct: 479 AIFTFPQERPMLIRERSSGMYRLSSYYFARMAGDLPMELVLPTIFVTIAYWMGGLKPSLL 538

Query: 183 XXXXXXXXXXXXXXXSQGLGLALGAVIMDVKQATTLASVTMLIFLLAGGYYIQHIPSFIA 362
                          SQGLGLALGA+IMDVKQ T LASVTML+FLLAGGYYIQHIP FIA
Sbjct: 539 TFVLTLLVILYNVLVSQGLGLALGAIIMDVKQGTALASVTMLVFLLAGGYYIQHIPPFIA 598

Query: 363 WLKYISFSHYCYKLLIGVQYSDTDYYVCGAGVRCKVLEFPAIQHLGLD 506
           WLKYISFSHYCYKLL+GVQY++ + Y CG  + CKV EFPAI++LG+D
Sbjct: 599 WLKYISFSHYCYKLLVGVQYAENEVYECGLRMHCKVWEFPAIKYLGID 646


>emb|CAN62390.1| hypothetical protein VITISV_039480 [Vitis vinifera]
          Length = 696

 Score =  257 bits (656), Expect = 8e-67
 Identities = 125/168 (74%), Positives = 137/168 (81%)
 Frame = +3

Query: 3    AIFTFPQERPMLIKERSSGMYRLSSYYFARIAGDLPMELVLPTISVAITYWMSGLKPSXX 182
            AIFTFPQERPMLI+ERSSGMYRLSSYYFAR+AGDLPMELVLPTI V I YWM GLKPS  
Sbjct: 499  AIFTFPQERPMLIRERSSGMYRLSSYYFARMAGDLPMELVLPTIFVTIAYWMGGLKPSLL 558

Query: 183  XXXXXXXXXXXXXXXSQGLGLALGAVIMDVKQATTLASVTMLIFLLAGGYYIQHIPSFIA 362
                           SQGLGLALGA+IMDVKQ T LASVTML+FLLAGGYYIQHIP FIA
Sbjct: 559  TFVLTLLVILYNVLVSQGLGLALGAIIMDVKQGTALASVTMLVFLLAGGYYIQHIPPFIA 618

Query: 363  WLKYISFSHYCYKLLIGVQYSDTDYYVCGAGVRCKVLEFPAIQHLGLD 506
            WLKYISFSHYCYKLL+GVQY++ + Y CG  + CKV EFPAI++LG+D
Sbjct: 619  WLKYISFSHYCYKLLVGVQYAENEVYECGLRMHCKVWEFPAIKYLGID 666


>ref|XP_002524381.1| ATP-binding cassette transporter, putative [Ricinus communis]
            gi|223536342|gb|EEF37992.1| ATP-binding cassette
            transporter, putative [Ricinus communis]
          Length = 709

 Score =  255 bits (652), Expect = 2e-66
 Identities = 124/174 (71%), Positives = 141/174 (81%)
 Frame = +3

Query: 3    AIFTFPQERPMLIKERSSGMYRLSSYYFARIAGDLPMELVLPTISVAITYWMSGLKPSXX 182
            AIF FPQERP+LIKERSSGMYRLSSYYFAR+AGDLPMELV+P I V + YWM GLKPS  
Sbjct: 512  AIFAFPQERPILIKERSSGMYRLSSYYFARMAGDLPMELVMPIIFVTVAYWMGGLKPSLI 571

Query: 183  XXXXXXXXXXXXXXXSQGLGLALGAVIMDVKQATTLASVTMLIFLLAGGYYIQHIPSFIA 362
                           SQGLGLALGAV+MDVKQ TTLASVTML+FLLAGGYYIQHIP+FIA
Sbjct: 572  TFVLTLLIILFNVLVSQGLGLALGAVLMDVKQGTTLASVTMLVFLLAGGYYIQHIPAFIA 631

Query: 363  WLKYISFSHYCYKLLIGVQYSDTDYYVCGAGVRCKVLEFPAIQHLGLDSRRLDL 524
            WLKYISFSHYCYKLL+GVQYS  + Y C AG+ C+V++FPAI++LGLD+   D+
Sbjct: 632  WLKYISFSHYCYKLLVGVQYSVNEVYECEAGMHCRVMDFPAIRYLGLDNMWWDV 685