BLASTX nr result

ID: Coptis24_contig00032973 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032973
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274907.2| PREDICTED: uncharacterized protein LOC100266...   209   3e-52
emb|CBI25059.3| unnamed protein product [Vitis vinifera]              209   3e-52
ref|XP_002302082.1| predicted protein [Populus trichocarpa] gi|2...   184   9e-45
ref|XP_002306805.1| predicted protein [Populus trichocarpa] gi|2...   175   6e-42
ref|XP_004145416.1| PREDICTED: uncharacterized protein LOC101210...   174   2e-41

>ref|XP_002274907.2| PREDICTED: uncharacterized protein LOC100266517 [Vitis vinifera]
          Length = 800

 Score =  209 bits (532), Expect = 3e-52
 Identities = 135/258 (52%), Positives = 166/258 (64%), Gaps = 49/258 (18%)
 Frame = -3

Query: 634 DRQRRSPSVVARLMGLDALPESIREPLKKPELRRSASESR-SKDLLQCRFTEGNN-SLHQ 461
           D+QRRSPSV+ARLMGL+ LP S  EP+KK ELRRSASESR SKDLLQCRF +GNN  L Q
Sbjct: 178 DKQRRSPSVIARLMGLEQLPHSCPEPVKKAELRRSASESRVSKDLLQCRFVDGNNFQLKQ 237

Query: 460 -KQTNAGVIAES----------YRSEGGGVK---------RNLKPDQVKIVP----ISQW 353
            +Q+N G    S          +R+  G            RN+K +  + +      SQW
Sbjct: 238 SQQSNLGSSISSNVIRDNASIGHRASNGRALDPYPMEYPVRNVKAEPPRALQRGLGSSQW 297

Query: 352 KS---RKNFFDSEDFFPEPKHTSSLYGELEKRLKMRGISEPAEDLETLKHILEALQLKGL 182
           KS   RK+FFDSEDFFPEPK T S+YGE+E+RLKMRGI EPA+DLETLK ILEALQLKGL
Sbjct: 298 KSPQQRKSFFDSEDFFPEPKQTVSIYGEIERRLKMRGIDEPAKDLETLKQILEALQLKGL 357

Query: 181 LHSRRKTQQISNRNFI-------KESPIVVMK-----SSSKSPGRIGNQSPP----SKVS 50
           LH+++ T Q ++RN +        ESPIVVMK     +S+  P R G +SPP    +K  
Sbjct: 358 LHTKKPTNQFNHRNLVYDLSFPHDESPIVVMKPGRSPASTHRPLRTGKESPPPTSRTKPV 417

Query: 49  MRRN----GDTLPPVRRR 8
           +RRN    G+T+P V  R
Sbjct: 418 VRRNANLSGETMPSVSPR 435


>emb|CBI25059.3| unnamed protein product [Vitis vinifera]
          Length = 709

 Score =  209 bits (532), Expect = 3e-52
 Identities = 135/258 (52%), Positives = 166/258 (64%), Gaps = 49/258 (18%)
 Frame = -3

Query: 634 DRQRRSPSVVARLMGLDALPESIREPLKKPELRRSASESR-SKDLLQCRFTEGNN-SLHQ 461
           D+QRRSPSV+ARLMGL+ LP S  EP+KK ELRRSASESR SKDLLQCRF +GNN  L Q
Sbjct: 178 DKQRRSPSVIARLMGLEQLPHSCPEPVKKAELRRSASESRVSKDLLQCRFVDGNNFQLKQ 237

Query: 460 -KQTNAGVIAES----------YRSEGGGVK---------RNLKPDQVKIVP----ISQW 353
            +Q+N G    S          +R+  G            RN+K +  + +      SQW
Sbjct: 238 SQQSNLGSSISSNVIRDNASIGHRASNGRALDPYPMEYPVRNVKAEPPRALQRGLGSSQW 297

Query: 352 KS---RKNFFDSEDFFPEPKHTSSLYGELEKRLKMRGISEPAEDLETLKHILEALQLKGL 182
           KS   RK+FFDSEDFFPEPK T S+YGE+E+RLKMRGI EPA+DLETLK ILEALQLKGL
Sbjct: 298 KSPQQRKSFFDSEDFFPEPKQTVSIYGEIERRLKMRGIDEPAKDLETLKQILEALQLKGL 357

Query: 181 LHSRRKTQQISNRNFI-------KESPIVVMK-----SSSKSPGRIGNQSPP----SKVS 50
           LH+++ T Q ++RN +        ESPIVVMK     +S+  P R G +SPP    +K  
Sbjct: 358 LHTKKPTNQFNHRNLVYDLSFPHDESPIVVMKPGRSPASTHRPLRTGKESPPPTSRTKPV 417

Query: 49  MRRN----GDTLPPVRRR 8
           +RRN    G+T+P V  R
Sbjct: 418 VRRNANLSGETMPSVSPR 435


>ref|XP_002302082.1| predicted protein [Populus trichocarpa] gi|222843808|gb|EEE81355.1|
           predicted protein [Populus trichocarpa]
          Length = 789

 Score =  184 bits (468), Expect = 9e-45
 Identities = 118/241 (48%), Positives = 155/241 (64%), Gaps = 29/241 (12%)
 Frame = -3

Query: 637 DDRQRRSPSVVARLMGLDALPESIREPLKKPELRRSASESR-SKDLLQCRFTEGNNSLHQ 461
           +D+QRRSPSV+ARLMGL+ L ++  E +KKPELRRSASESR S++L Q RF +G N    
Sbjct: 178 NDKQRRSPSVIARLMGLEPLHDADPEQVKKPELRRSASESRASRELFQYRFIDGVN-FQL 236

Query: 460 KQTNAGVIAESYRSEGGGVK----RNLKPDQVKIVPISQWK----------SRKNFFDSE 323
           KQT       +  S+G   +    R + P    +V  ++ +           RK+FFDS 
Sbjct: 237 KQTQQQNKQSNVSSKGAKDQKLNGRTVDPKAYNVVRNARAEPARAQHRGIGQRKSFFDSA 296

Query: 322 DFFPEPKHTSSLYGELEKRLKMRGISEPAEDLETLKHILEALQLKGLLHSRRKTQQISNR 143
           DFFPEPK T S+YGE+EKRL+MRGI EP++DLETLKHILEALQLKGLLHS +   QI+ R
Sbjct: 297 DFFPEPKQTVSIYGEIEKRLRMRGIDEPSKDLETLKHILEALQLKGLLHSNKPANQINQR 356

Query: 142 NFI-KESPIVVMK------SSSKSPGRIGNQSPPS----KVSMRRN---GDTLPPVRRRQ 5
           NF+ +ESPIV+MK      S +   GRI N SP S    +  +RR+    +TLP +  R+
Sbjct: 357 NFVYEESPIVLMKPAKSLASMNMPAGRIINDSPLSSFRPRSGVRRDPNYAETLPAMSPRR 416

Query: 4   D 2
           +
Sbjct: 417 E 417


>ref|XP_002306805.1| predicted protein [Populus trichocarpa] gi|222856254|gb|EEE93801.1|
           predicted protein [Populus trichocarpa]
          Length = 604

 Score =  175 bits (444), Expect = 6e-42
 Identities = 106/211 (50%), Positives = 139/211 (65%), Gaps = 12/211 (5%)
 Frame = -3

Query: 637 DDRQRRSPSVVARLMGLDALPESIREP---LKKPELRRSASESR-SKDLLQCRFTEGN-- 476
           +D+QRRSPSV+ARLMGL++L +S  +P   + KPELRRSASESR S+DL Q RF +GN  
Sbjct: 130 NDKQRRSPSVIARLMGLESLQDSSPDPSEHVNKPELRRSASESRASRDLFQYRFIDGNLN 189

Query: 475 ---NSLHQKQTNA--GVIAESYRSEGGGVKRNLKPDQVKIVPISQWKSRKNFFDSEDFFP 311
               ++  K  NA   + AE  R++  GV +                 RK+FFDS DFFP
Sbjct: 190 PNGRAVDPKAYNAVRNLRAEPARAQNKGVGQ-----------------RKSFFDSADFFP 232

Query: 310 EPKHTSSLYGELEKRLKMRGISEPAEDLETLKHILEALQLKGLLHSRRKTQQISNRNFI- 134
           EPK T S+ GE+EKRLKMRGI EP++DLETLKHILEALQLKGLLHS++ T Q + RNF+ 
Sbjct: 233 EPKQTISICGEIEKRLKMRGIDEPSKDLETLKHILEALQLKGLLHSKKLTNQTNQRNFVY 292

Query: 133 KESPIVVMKSSSKSPGRIGNQSPPSKVSMRR 41
           +E+P      ++++ GR  N+  P  V  +R
Sbjct: 293 EETPNTSSPMANENGGRSPNRRRPMSVETQR 323


>ref|XP_004145416.1| PREDICTED: uncharacterized protein LOC101210692 [Cucumis sativus]
           gi|449470997|ref|XP_004153178.1| PREDICTED:
           uncharacterized protein LOC101215490 [Cucumis sativus]
          Length = 803

 Score =  174 bits (440), Expect = 2e-41
 Identities = 120/250 (48%), Positives = 145/250 (58%), Gaps = 39/250 (15%)
 Frame = -3

Query: 634 DRQRRSPSVVARLMGLDALPESIREPLKKPELRRSASESR-SKDLLQCRFTEGNN-SLHQ 461
           D QRRSPSV+ARLMGL+ LP S  EP+K  ELRRSASESR SKD    RF +GNN  L Q
Sbjct: 177 DEQRRSPSVIARLMGLEPLPNSEPEPIKNAELRRSASESRVSKDFYHNRFIDGNNFRLKQ 236

Query: 460 KQ---------TNAGVIAESYRSEGGGVKRNLKPD----QVKIVPISQWKS---RKNFFD 329
            Q         +N  +   +       VK   + D      K  P+   +    RK FFD
Sbjct: 237 SQHLSSQDNNGSNVLIKNAANMDHSSNVKMLDRSDFAARSTKAEPVRSQRGIGPRKIFFD 296

Query: 328 SEDFFPEPKHTSSLYGELEKRLKMRGISEPAEDLETLKHILEALQLKGLLHSRRKTQQ-- 155
           S D FPEPK  +S+YGE+EKRLKMRGI EP++DLETLK ILEALQLKGLLHS++   Q  
Sbjct: 297 SGDVFPEPKQPASIYGEIEKRLKMRGIDEPSKDLETLKQILEALQLKGLLHSKKSPSQRK 356

Query: 154 -----ISNRNFIKESPIVVMKSSSKSP------GRIGNQSPPSKVSMRRNG--------D 32
                IS++    ESPIVVM+  ++SP      GRI N SPPS    R+ G        D
Sbjct: 357 LVYDRISSQ---AESPIVVMR-PARSPTSVNRLGRISNDSPPSSYRARQIGRRNVNVTSD 412

Query: 31  TLPPVRRRQD 2
           ++P V  R D
Sbjct: 413 SMPSVTTRSD 422


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