BLASTX nr result

ID: Coptis24_contig00032966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032966
         (513 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278135.1| PREDICTED: putative disease resistance prote...    58   2e-14
emb|CAN62186.1| hypothetical protein VITISV_003708 [Vitis vinifera]    57   3e-14
ref|XP_002511340.1| Disease resistance protein RPP13, putative [...    57   2e-06

>ref|XP_002278135.1| PREDICTED: putative disease resistance protein At1g58400-like
           [Vitis vinifera]
          Length = 653

 Score = 58.2 bits (139), Expect(2) = 2e-14
 Identities = 36/99 (36%), Positives = 54/99 (54%)
 Frame = +1

Query: 1   FVVHMENQSASDQTILIDQCKIELENLEKSLLHVRNQMLEDKKGKAVKPESLDVEENTSK 180
           F++ M+  + SDQ + ID  + EL+     L    ++M E     ++K E    +EN   
Sbjct: 78  FIIQMDAHNGSDQKVWIDSFRSELQKAGSRLAETVHRMRE--LNNSIKGEK-GKDENFHG 134

Query: 181 ADAEPGEASSSPTSFKVYLSNLPYFLQSCLKYCCIFPRS 297
            D   GE S+S ++ K+  +NLPY LQ CL YCCIFP +
Sbjct: 135 MDE--GETSAS-SALKLQYTNLPYHLQICLTYCCIFPEN 170



 Score = 45.8 bits (107), Expect(2) = 2e-14
 Identities = 31/78 (39%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
 Frame = +2

Query: 290 LGVLHV-----DGNKLKVPETIRAFMLCMMGEEGFIVSCTSSDTNVPPTTRRLSIHXXXX 454
           LG+L V     +G KL VP   R   L  + EE  I +C SSD++ P T R +SIH    
Sbjct: 210 LGMLQVVDHPGNGIKLVVPSHYREVCLHKIKEEKLITACPSSDSSFPLTVRCVSIHSDMK 269

Query: 455 XXXXXXXXXXXRSLFLFG 508
                      RSLFLFG
Sbjct: 270 QVETVLNNVRTRSLFLFG 287


>emb|CAN62186.1| hypothetical protein VITISV_003708 [Vitis vinifera]
          Length = 653

 Score = 57.4 bits (137), Expect(2) = 3e-14
 Identities = 35/99 (35%), Positives = 55/99 (55%)
 Frame = +1

Query: 1   FVVHMENQSASDQTILIDQCKIELENLEKSLLHVRNQMLEDKKGKAVKPESLDVEENTSK 180
           F++ M+  + SDQ + ID  + EL+     +    ++M E     ++K E  + +EN   
Sbjct: 78  FIIQMDAHNGSDQKVWIDSFRSELQKAGSRVAETVHRMRE--LNNSIKGEKGE-DENFHG 134

Query: 181 ADAEPGEASSSPTSFKVYLSNLPYFLQSCLKYCCIFPRS 297
            D   GE S+S ++ K+  +NLPY LQ CL YCCIFP +
Sbjct: 135 MDE--GETSAS-SALKLQYTNLPYHLQICLTYCCIFPEN 170



 Score = 45.8 bits (107), Expect(2) = 3e-14
 Identities = 31/78 (39%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
 Frame = +2

Query: 290 LGVLHV-----DGNKLKVPETIRAFMLCMMGEEGFIVSCTSSDTNVPPTTRRLSIHXXXX 454
           LG+L V     +G KL VP   R   L  + EE  I +C SSD++ P T R +SIH    
Sbjct: 210 LGMLQVVDHPGNGIKLVVPSHYREVCLHKIKEEKLITACPSSDSSFPLTVRCVSIHSDMK 269

Query: 455 XXXXXXXXXXXRSLFLFG 508
                      RSLFLFG
Sbjct: 270 QVETVLNNVRTRSLFLFG 287


>ref|XP_002511340.1| Disease resistance protein RPP13, putative [Ricinus communis]
           gi|223550455|gb|EEF51942.1| Disease resistance protein
           RPP13, putative [Ricinus communis]
          Length = 685

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 32/131 (24%)
 Frame = +1

Query: 1   FVVHMENQSASDQTILIDQCKIELENLEKSLLHVRNQMLEDKKGKAVKPESLDVEE---- 168
           F++ ++ Q  SD+    +  +IEL+  E SL     ++ E K     K E  + E+    
Sbjct: 76  FIIQIDRQIGSDRLASTECFRIELQKSESSLFETIQRIRELKNSTVTKEEKREKEDSNEQ 135

Query: 169 -------------NTSKADAEPGE---------------ASSSPTSFKVYLSNLPYFLQS 264
                        NT +   E  E               ++SS   FK+   +LPY+LQS
Sbjct: 136 SHGREEGKMRLSSNTIEGPKEENEGNMEQFHEQEEGQTLSASSSVPFKLKYDSLPYYLQS 195

Query: 265 CLKYCCIFPRS 297
           CL YCCIFP +
Sbjct: 196 CLMYCCIFPEN 206


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