BLASTX nr result

ID: Coptis24_contig00032960 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032960
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526847.1| DELLA protein GAI1, putative [Ricinus commun...   168   5e-40
ref|XP_002266212.1| PREDICTED: DELLA protein RGL2 [Vitis vinifera]    165   3e-39
ref|XP_002327229.1| GRAS family transcription factor [Populus tr...   164   9e-39
ref|XP_002326001.1| GRAS family transcription factor [Populus tr...   158   5e-37
ref|XP_003548951.1| PREDICTED: DELLA protein GAI-like [Glycine max]   151   5e-35

>ref|XP_002526847.1| DELLA protein GAI1, putative [Ricinus communis]
           gi|223533851|gb|EEF35582.1| DELLA protein GAI1, putative
           [Ricinus communis]
          Length = 471

 Score =  168 bits (425), Expect = 5e-40
 Identities = 86/132 (65%), Positives = 105/132 (79%), Gaps = 8/132 (6%)
 Frame = +3

Query: 3   DSSRTHRSFLSRFMESLHYFAAMFDSLDDCLSPESVERLCIEKNHLGKEIKRMMNYEKDE 182
           + SR+ RSFLSRFMESLHYFAAM+DSLDDCL  ES ERL IEKNHLGKEIK M+NY+KD+
Sbjct: 323 EGSRSPRSFLSRFMESLHYFAAMYDSLDDCLPLESSERLSIEKNHLGKEIKSMLNYDKDD 382

Query: 183 EN----HQRLETWKGRLESKGFVSKKLSSRSVIQAKLLLKIRSHSSPVVYGG----GNGF 338
            N    ++++ETWKGR+E+ GF   KLSS+S+IQAKLLLKIR+H SP  + G    G+GF
Sbjct: 383 LNCATRYEKMETWKGRMENHGFSGMKLSSKSLIQAKLLLKIRTHHSPPQFNGENSSGSGF 442

Query: 339 RVLEREEGCALS 374
           RV ER+EG  +S
Sbjct: 443 RVFERDEGKTIS 454


>ref|XP_002266212.1| PREDICTED: DELLA protein RGL2 [Vitis vinifera]
          Length = 455

 Score =  165 bits (418), Expect = 3e-39
 Identities = 85/128 (66%), Positives = 103/128 (80%), Gaps = 4/128 (3%)
 Frame = +3

Query: 3   DSSRTHRSFLSRFMESLHYFAAMFDSLDDCLSPESVERLCIEKNHLGKEIKRMMNYEKDE 182
           + SR+ +SFLSRFMESLHYFAAMFDSLDDCL  ES ERL IEKNHLGKEIK M+NY+KD+
Sbjct: 311 EGSRSPQSFLSRFMESLHYFAAMFDSLDDCLPLESPERLSIEKNHLGKEIKSMLNYDKDD 370

Query: 183 EN---HQRLETWKGRLESKGFVSKKLSSRSVIQAKLLLKIRSHSSPVVYGG-GNGFRVLE 350
            N   ++++ETWKGR+ES GF   KLSS+S+IQAKLLLKIRSH  P+ + G   GFRV E
Sbjct: 371 TNCPRYEKMETWKGRMESHGFTGIKLSSKSMIQAKLLLKIRSHYCPLQFDGESGGFRVFE 430

Query: 351 REEGCALS 374
           R++  A+S
Sbjct: 431 RDDERAIS 438


>ref|XP_002327229.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222835599|gb|EEE74034.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 463

 Score =  164 bits (414), Expect = 9e-39
 Identities = 84/129 (65%), Positives = 102/129 (79%), Gaps = 5/129 (3%)
 Frame = +3

Query: 3   DSSRTHRSFLSRFMESLHYFAAMFDSLDDCLSPESVERLCIEKNHLGKEIKRMMNYEKDE 182
           + SR+ RSFLSRFMESLHYFAAMFDSLDD L  ES ERL IEKNHLGKEIK M+NY+KD+
Sbjct: 318 EGSRSPRSFLSRFMESLHYFAAMFDSLDDFLPLESSERLSIEKNHLGKEIKSMLNYDKDD 377

Query: 183 EN---HQRLETWKGRLESKGFVSKKLSSRSVIQAKLLLKIRSHSSPVVYGG--GNGFRVL 347
            N   + ++ETWKGR+E  GF   KLSS+S+IQAKLLLKIR+H  P+ + G  G GF+V 
Sbjct: 378 ANCPRYDKMETWKGRMEGHGFAGMKLSSKSLIQAKLLLKIRTHYCPLQFDGESGGGFKVF 437

Query: 348 EREEGCALS 374
           ER++G A+S
Sbjct: 438 ERDDGKAIS 446


>ref|XP_002326001.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222862876|gb|EEF00383.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 463

 Score =  158 bits (399), Expect = 5e-37
 Identities = 81/129 (62%), Positives = 100/129 (77%), Gaps = 5/129 (3%)
 Frame = +3

Query: 3   DSSRTHRSFLSRFMESLHYFAAMFDSLDDCLSPESVERLCIEKNHLGKEIKRMMNYEKDE 182
           + SR+ RSFLSRFMESLHYFAAMFDSLDDCL  ES ERL IEKNHLGK+IKRM+N +KD+
Sbjct: 317 EGSRSPRSFLSRFMESLHYFAAMFDSLDDCLPLESSERLSIEKNHLGKDIKRMLNCDKDD 376

Query: 183 EN---HQRLETWKGRLESKGFVSKKLSSRSVIQAKLLLKIRSHSSPVVYGGG--NGFRVL 347
            N   + ++ETWKGR+E  GF   KLSS+S+IQAKLLLKIR+H  P+ + G     F+V 
Sbjct: 377 ANCPRYDKMETWKGRMEGHGFAGIKLSSKSLIQAKLLLKIRTHYCPLQFDGDFCGXFKVF 436

Query: 348 EREEGCALS 374
           ER++G  +S
Sbjct: 437 ERDDGKGIS 445


>ref|XP_003548951.1| PREDICTED: DELLA protein GAI-like [Glycine max]
          Length = 471

 Score =  151 bits (382), Expect = 5e-35
 Identities = 79/130 (60%), Positives = 99/130 (76%), Gaps = 6/130 (4%)
 Frame = +3

Query: 3   DSSRTHRSFLSRFMESLHYFAAMFDSLDDCLSPESVERLCIEKNHLGKEIKRMMNYEKDE 182
           + SR+ ++FLSRF ESLHYFAAMFDSLDDCL  ES ERL IEK  LGKEIK M+NY+ D 
Sbjct: 325 EGSRSLKTFLSRFTESLHYFAAMFDSLDDCLPLESTERLKIEKKVLGKEIKSMLNYDMDG 384

Query: 183 ----ENHQRLETWKGRLESKGFVSKKLSSRSVIQAKLLLKIRSHSSPVVY--GGGNGFRV 344
                 ++R+ETWKGR+E+ GFV +K+SS+ VIQAKLLLK+R+H  P+ +   GG GFRV
Sbjct: 385 VDYCPKYERMETWKGRMENHGFVGRKISSKCVIQAKLLLKMRTHYYPLQFEEEGGGGFRV 444

Query: 345 LEREEGCALS 374
            ER+EG  +S
Sbjct: 445 SERDEGRVIS 454


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