BLASTX nr result
ID: Coptis24_contig00032960
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032960 (374 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002526847.1| DELLA protein GAI1, putative [Ricinus commun... 168 5e-40 ref|XP_002266212.1| PREDICTED: DELLA protein RGL2 [Vitis vinifera] 165 3e-39 ref|XP_002327229.1| GRAS family transcription factor [Populus tr... 164 9e-39 ref|XP_002326001.1| GRAS family transcription factor [Populus tr... 158 5e-37 ref|XP_003548951.1| PREDICTED: DELLA protein GAI-like [Glycine max] 151 5e-35 >ref|XP_002526847.1| DELLA protein GAI1, putative [Ricinus communis] gi|223533851|gb|EEF35582.1| DELLA protein GAI1, putative [Ricinus communis] Length = 471 Score = 168 bits (425), Expect = 5e-40 Identities = 86/132 (65%), Positives = 105/132 (79%), Gaps = 8/132 (6%) Frame = +3 Query: 3 DSSRTHRSFLSRFMESLHYFAAMFDSLDDCLSPESVERLCIEKNHLGKEIKRMMNYEKDE 182 + SR+ RSFLSRFMESLHYFAAM+DSLDDCL ES ERL IEKNHLGKEIK M+NY+KD+ Sbjct: 323 EGSRSPRSFLSRFMESLHYFAAMYDSLDDCLPLESSERLSIEKNHLGKEIKSMLNYDKDD 382 Query: 183 EN----HQRLETWKGRLESKGFVSKKLSSRSVIQAKLLLKIRSHSSPVVYGG----GNGF 338 N ++++ETWKGR+E+ GF KLSS+S+IQAKLLLKIR+H SP + G G+GF Sbjct: 383 LNCATRYEKMETWKGRMENHGFSGMKLSSKSLIQAKLLLKIRTHHSPPQFNGENSSGSGF 442 Query: 339 RVLEREEGCALS 374 RV ER+EG +S Sbjct: 443 RVFERDEGKTIS 454 >ref|XP_002266212.1| PREDICTED: DELLA protein RGL2 [Vitis vinifera] Length = 455 Score = 165 bits (418), Expect = 3e-39 Identities = 85/128 (66%), Positives = 103/128 (80%), Gaps = 4/128 (3%) Frame = +3 Query: 3 DSSRTHRSFLSRFMESLHYFAAMFDSLDDCLSPESVERLCIEKNHLGKEIKRMMNYEKDE 182 + SR+ +SFLSRFMESLHYFAAMFDSLDDCL ES ERL IEKNHLGKEIK M+NY+KD+ Sbjct: 311 EGSRSPQSFLSRFMESLHYFAAMFDSLDDCLPLESPERLSIEKNHLGKEIKSMLNYDKDD 370 Query: 183 EN---HQRLETWKGRLESKGFVSKKLSSRSVIQAKLLLKIRSHSSPVVYGG-GNGFRVLE 350 N ++++ETWKGR+ES GF KLSS+S+IQAKLLLKIRSH P+ + G GFRV E Sbjct: 371 TNCPRYEKMETWKGRMESHGFTGIKLSSKSMIQAKLLLKIRSHYCPLQFDGESGGFRVFE 430 Query: 351 REEGCALS 374 R++ A+S Sbjct: 431 RDDERAIS 438 >ref|XP_002327229.1| GRAS family transcription factor [Populus trichocarpa] gi|222835599|gb|EEE74034.1| GRAS family transcription factor [Populus trichocarpa] Length = 463 Score = 164 bits (414), Expect = 9e-39 Identities = 84/129 (65%), Positives = 102/129 (79%), Gaps = 5/129 (3%) Frame = +3 Query: 3 DSSRTHRSFLSRFMESLHYFAAMFDSLDDCLSPESVERLCIEKNHLGKEIKRMMNYEKDE 182 + SR+ RSFLSRFMESLHYFAAMFDSLDD L ES ERL IEKNHLGKEIK M+NY+KD+ Sbjct: 318 EGSRSPRSFLSRFMESLHYFAAMFDSLDDFLPLESSERLSIEKNHLGKEIKSMLNYDKDD 377 Query: 183 EN---HQRLETWKGRLESKGFVSKKLSSRSVIQAKLLLKIRSHSSPVVYGG--GNGFRVL 347 N + ++ETWKGR+E GF KLSS+S+IQAKLLLKIR+H P+ + G G GF+V Sbjct: 378 ANCPRYDKMETWKGRMEGHGFAGMKLSSKSLIQAKLLLKIRTHYCPLQFDGESGGGFKVF 437 Query: 348 EREEGCALS 374 ER++G A+S Sbjct: 438 ERDDGKAIS 446 >ref|XP_002326001.1| GRAS family transcription factor [Populus trichocarpa] gi|222862876|gb|EEF00383.1| GRAS family transcription factor [Populus trichocarpa] Length = 463 Score = 158 bits (399), Expect = 5e-37 Identities = 81/129 (62%), Positives = 100/129 (77%), Gaps = 5/129 (3%) Frame = +3 Query: 3 DSSRTHRSFLSRFMESLHYFAAMFDSLDDCLSPESVERLCIEKNHLGKEIKRMMNYEKDE 182 + SR+ RSFLSRFMESLHYFAAMFDSLDDCL ES ERL IEKNHLGK+IKRM+N +KD+ Sbjct: 317 EGSRSPRSFLSRFMESLHYFAAMFDSLDDCLPLESSERLSIEKNHLGKDIKRMLNCDKDD 376 Query: 183 EN---HQRLETWKGRLESKGFVSKKLSSRSVIQAKLLLKIRSHSSPVVYGGG--NGFRVL 347 N + ++ETWKGR+E GF KLSS+S+IQAKLLLKIR+H P+ + G F+V Sbjct: 377 ANCPRYDKMETWKGRMEGHGFAGIKLSSKSLIQAKLLLKIRTHYCPLQFDGDFCGXFKVF 436 Query: 348 EREEGCALS 374 ER++G +S Sbjct: 437 ERDDGKGIS 445 >ref|XP_003548951.1| PREDICTED: DELLA protein GAI-like [Glycine max] Length = 471 Score = 151 bits (382), Expect = 5e-35 Identities = 79/130 (60%), Positives = 99/130 (76%), Gaps = 6/130 (4%) Frame = +3 Query: 3 DSSRTHRSFLSRFMESLHYFAAMFDSLDDCLSPESVERLCIEKNHLGKEIKRMMNYEKDE 182 + SR+ ++FLSRF ESLHYFAAMFDSLDDCL ES ERL IEK LGKEIK M+NY+ D Sbjct: 325 EGSRSLKTFLSRFTESLHYFAAMFDSLDDCLPLESTERLKIEKKVLGKEIKSMLNYDMDG 384 Query: 183 ----ENHQRLETWKGRLESKGFVSKKLSSRSVIQAKLLLKIRSHSSPVVY--GGGNGFRV 344 ++R+ETWKGR+E+ GFV +K+SS+ VIQAKLLLK+R+H P+ + GG GFRV Sbjct: 385 VDYCPKYERMETWKGRMENHGFVGRKISSKCVIQAKLLLKMRTHYYPLQFEEEGGGGFRV 444 Query: 345 LEREEGCALS 374 ER+EG +S Sbjct: 445 SERDEGRVIS 454