BLASTX nr result

ID: Coptis24_contig00032957 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032957
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271655.2| PREDICTED: uncharacterized protein LOC100258...   105   3e-21
ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_002317800.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
gb|AFP55540.1| hypothetical protein [Rosa rugosa]                      91   1e-16
ref|XP_002515683.1| conserved hypothetical protein [Ricinus comm...    86   3e-15

>ref|XP_002271655.2| PREDICTED: uncharacterized protein LOC100258836 [Vitis vinifera]
          Length = 2390

 Score =  105 bits (263), Expect = 3e-21
 Identities = 71/152 (46%), Positives = 90/152 (59%), Gaps = 2/152 (1%)
 Frame = +3

Query: 6   LDVDLVSFSPQLEGFDSTLKGCEGPLTTPKVVISPQSKCIAALDSTGGLDVFELHEERSS 185
           LD++ V  S Q+EG  S  KG  G +T+ KV+ISP  K +A LD TG LD+F+L  E  S
Sbjct: 252 LDLEPVC-STQVEGLYSKPKGYIGQITSSKVLISPHGKFVATLDLTGCLDIFKLDGECCS 310

Query: 186 LSIVDLSHSGLSQ-TAKCSIGKRKFVKDITDFTWWSDRVLIIAKVSG-VDDPDIFTGKSL 359
           LS         SQ T   S    KF+  I DFTWWSD  L++AK SG V   DI +G  L
Sbjct: 311 LSSFAYGMRNDSQETDNLSNEVGKFLNGIVDFTWWSDHTLVLAKRSGTVIMLDILSGIKL 370

Query: 360 LEDDPKFCMLVLQRVQQCQGCVLLMELSPSEK 455
           L +DP + M VL+RVQQ QG   L+E + SE+
Sbjct: 371 LGNDPVYSMPVLERVQQFQGQFFLLESTSSEE 402


>ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|222868975|gb|EEF06106.1|
           predicted protein [Populus trichocarpa]
          Length = 2421

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 55/139 (39%), Positives = 79/139 (56%), Gaps = 2/139 (1%)
 Frame = +3

Query: 27  FSPQLEGFDSTLKGCEGPLTTPKVVISPQSKCIAALDSTGGLDVFELHEE-RSSLSIVDL 203
           FS Q EG  S  K  +  L  PKV+ISP  K +A LD +G L +F++ +E RS L     
Sbjct: 278 FSIQFEGLYSKSK--DAILACPKVLISPLGKFVATLDISGCLHIFKMDKESRSLLIFAGE 335

Query: 204 SHSGLSQTAKCSIGKRKFVKDITDFTWWSDRVLIIAKVSG-VDDPDIFTGKSLLEDDPKF 380
              G   T+  + G+ + + D+ DFTWWSD ++ IAK  G V   DI TG    EDD  +
Sbjct: 336 EKLGSQGTSNLTNGQNELLSDVVDFTWWSDHIMTIAKRGGTVTMLDIVTGLKFQEDDHLY 395

Query: 381 CMLVLQRVQQCQGCVLLME 437
            ++VL R+QQ QG + +++
Sbjct: 396 SIIVLDRIQQFQGHIFVLD 414


>ref|XP_002317800.1| predicted protein [Populus trichocarpa] gi|222858473|gb|EEE96020.1|
           predicted protein [Populus trichocarpa]
          Length = 2414

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 56/138 (40%), Positives = 80/138 (57%), Gaps = 2/138 (1%)
 Frame = +3

Query: 30  SPQLEGFDSTLKGCEGPLTTPKVVISPQSKCIAALDSTGGLDVFELHEERSSLSIVDLSH 209
           S Q EG  S  K  +  L+ PKV+ISPQ K +A LD TG L +F++ +E  SL       
Sbjct: 259 SIQFEGLYSKSK--DAILSCPKVLISPQGKFVATLDITGRLHIFKMDKESRSLVSFACEE 316

Query: 210 SGLSQ-TAKCSIGKRKFVKDITDFTWWSDRVLIIAKVSGV-DDPDIFTGKSLLEDDPKFC 383
              SQ T+  + G+ + + DI DFTWWSDR++ +AK  G+    DI TG    E +  + 
Sbjct: 317 QLRSQGTSNITNGQNELLNDIVDFTWWSDRIMTLAKRGGILAMLDIVTGLKFQEHNHLYS 376

Query: 384 MLVLQRVQQCQGCVLLME 437
           MLVL R+QQ QG + +++
Sbjct: 377 MLVLDRIQQFQGRIFVLD 394


>gb|AFP55540.1| hypothetical protein [Rosa rugosa]
          Length = 2445

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 59/145 (40%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
 Frame = +3

Query: 27  FSPQLEGFDSTLKGCEGPLTTPKVVISPQSKCIAALDSTGGLDVFELHEERSSLSIVDLS 206
           F+ Q +GF S        L  PKV+ISPQ+K +A LD TG L VF++ +ER SLS     
Sbjct: 254 FTIQFDGFYSKPIALGSQLAYPKVLISPQAKFVATLDLTGRLHVFKMDKERFSLSKFTCR 313

Query: 207 HSGLSQ-TAKCSIGKRKFVKDITDFTWWSDRVLIIAKVSG-VDDPDIFTGKSLLEDDPKF 380
               SQ T   S G+ K + DI DFTWWSD +L  AK SG V   D+ +G  + E+   +
Sbjct: 314 ERYESQVTNNLSSGEGKELIDIVDFTWWSDHILTFAKRSGLVTMLDLLSGLEVEENGTVY 373

Query: 381 CMLVLQRVQQCQGCVLLMELSPSEK 455
              VL+R++  QG + L+E   S++
Sbjct: 374 SKPVLERIKLFQGNLFLLETLTSDE 398


>ref|XP_002515683.1| conserved hypothetical protein [Ricinus communis]
           gi|223545226|gb|EEF46735.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 2429

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 56/153 (36%), Positives = 86/153 (56%), Gaps = 2/153 (1%)
 Frame = +3

Query: 3   DLDVDLVSFSPQLEGFDSTLKGCEGPLTTPKVVISPQSKCIAALDSTGGLDVFELHEERS 182
           ++D++L+S S Q EG     K   G +  PKV++SP+   +A LD +G L +F+L +E+S
Sbjct: 258 NVDLELLS-SVQFEGLYHKSKDFLGQIAYPKVLMSPEGNFVATLDISGCLYIFKLDKEQS 316

Query: 183 SLSIVDLSHSGLSQTAKCSIGKRK-FVKDITDFTWWSDRVLIIAKVSGVDDP-DIFTGKS 356
           SLS + +     SQ       + K F+ D  DFTWWSD ++ +A+  GV    +I  G  
Sbjct: 317 SLSSIAVGGRFGSQVIDNLTNRHKEFLNDNIDFTWWSDHIVTLARRGGVFTMLNILAGLQ 376

Query: 357 LLEDDPKFCMLVLQRVQQCQGCVLLMELSPSEK 455
           L + D  + M VL RVQ+ QG + L+E    E+
Sbjct: 377 LQKSDHIYSMPVLDRVQKLQGHLFLVESKSFEE 409


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