BLASTX nr result
ID: Coptis24_contig00032957
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032957 (455 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271655.2| PREDICTED: uncharacterized protein LOC100258... 105 3e-21 ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|2... 92 3e-17 ref|XP_002317800.1| predicted protein [Populus trichocarpa] gi|2... 92 3e-17 gb|AFP55540.1| hypothetical protein [Rosa rugosa] 91 1e-16 ref|XP_002515683.1| conserved hypothetical protein [Ricinus comm... 86 3e-15 >ref|XP_002271655.2| PREDICTED: uncharacterized protein LOC100258836 [Vitis vinifera] Length = 2390 Score = 105 bits (263), Expect = 3e-21 Identities = 71/152 (46%), Positives = 90/152 (59%), Gaps = 2/152 (1%) Frame = +3 Query: 6 LDVDLVSFSPQLEGFDSTLKGCEGPLTTPKVVISPQSKCIAALDSTGGLDVFELHEERSS 185 LD++ V S Q+EG S KG G +T+ KV+ISP K +A LD TG LD+F+L E S Sbjct: 252 LDLEPVC-STQVEGLYSKPKGYIGQITSSKVLISPHGKFVATLDLTGCLDIFKLDGECCS 310 Query: 186 LSIVDLSHSGLSQ-TAKCSIGKRKFVKDITDFTWWSDRVLIIAKVSG-VDDPDIFTGKSL 359 LS SQ T S KF+ I DFTWWSD L++AK SG V DI +G L Sbjct: 311 LSSFAYGMRNDSQETDNLSNEVGKFLNGIVDFTWWSDHTLVLAKRSGTVIMLDILSGIKL 370 Query: 360 LEDDPKFCMLVLQRVQQCQGCVLLMELSPSEK 455 L +DP + M VL+RVQQ QG L+E + SE+ Sbjct: 371 LGNDPVYSMPVLERVQQFQGQFFLLESTSSEE 402 >ref|XP_002321979.1| predicted protein [Populus trichocarpa] gi|222868975|gb|EEF06106.1| predicted protein [Populus trichocarpa] Length = 2421 Score = 92.4 bits (228), Expect = 3e-17 Identities = 55/139 (39%), Positives = 79/139 (56%), Gaps = 2/139 (1%) Frame = +3 Query: 27 FSPQLEGFDSTLKGCEGPLTTPKVVISPQSKCIAALDSTGGLDVFELHEE-RSSLSIVDL 203 FS Q EG S K + L PKV+ISP K +A LD +G L +F++ +E RS L Sbjct: 278 FSIQFEGLYSKSK--DAILACPKVLISPLGKFVATLDISGCLHIFKMDKESRSLLIFAGE 335 Query: 204 SHSGLSQTAKCSIGKRKFVKDITDFTWWSDRVLIIAKVSG-VDDPDIFTGKSLLEDDPKF 380 G T+ + G+ + + D+ DFTWWSD ++ IAK G V DI TG EDD + Sbjct: 336 EKLGSQGTSNLTNGQNELLSDVVDFTWWSDHIMTIAKRGGTVTMLDIVTGLKFQEDDHLY 395 Query: 381 CMLVLQRVQQCQGCVLLME 437 ++VL R+QQ QG + +++ Sbjct: 396 SIIVLDRIQQFQGHIFVLD 414 >ref|XP_002317800.1| predicted protein [Populus trichocarpa] gi|222858473|gb|EEE96020.1| predicted protein [Populus trichocarpa] Length = 2414 Score = 92.4 bits (228), Expect = 3e-17 Identities = 56/138 (40%), Positives = 80/138 (57%), Gaps = 2/138 (1%) Frame = +3 Query: 30 SPQLEGFDSTLKGCEGPLTTPKVVISPQSKCIAALDSTGGLDVFELHEERSSLSIVDLSH 209 S Q EG S K + L+ PKV+ISPQ K +A LD TG L +F++ +E SL Sbjct: 259 SIQFEGLYSKSK--DAILSCPKVLISPQGKFVATLDITGRLHIFKMDKESRSLVSFACEE 316 Query: 210 SGLSQ-TAKCSIGKRKFVKDITDFTWWSDRVLIIAKVSGV-DDPDIFTGKSLLEDDPKFC 383 SQ T+ + G+ + + DI DFTWWSDR++ +AK G+ DI TG E + + Sbjct: 317 QLRSQGTSNITNGQNELLNDIVDFTWWSDRIMTLAKRGGILAMLDIVTGLKFQEHNHLYS 376 Query: 384 MLVLQRVQQCQGCVLLME 437 MLVL R+QQ QG + +++ Sbjct: 377 MLVLDRIQQFQGRIFVLD 394 >gb|AFP55540.1| hypothetical protein [Rosa rugosa] Length = 2445 Score = 90.5 bits (223), Expect = 1e-16 Identities = 59/145 (40%), Positives = 82/145 (56%), Gaps = 2/145 (1%) Frame = +3 Query: 27 FSPQLEGFDSTLKGCEGPLTTPKVVISPQSKCIAALDSTGGLDVFELHEERSSLSIVDLS 206 F+ Q +GF S L PKV+ISPQ+K +A LD TG L VF++ +ER SLS Sbjct: 254 FTIQFDGFYSKPIALGSQLAYPKVLISPQAKFVATLDLTGRLHVFKMDKERFSLSKFTCR 313 Query: 207 HSGLSQ-TAKCSIGKRKFVKDITDFTWWSDRVLIIAKVSG-VDDPDIFTGKSLLEDDPKF 380 SQ T S G+ K + DI DFTWWSD +L AK SG V D+ +G + E+ + Sbjct: 314 ERYESQVTNNLSSGEGKELIDIVDFTWWSDHILTFAKRSGLVTMLDLLSGLEVEENGTVY 373 Query: 381 CMLVLQRVQQCQGCVLLMELSPSEK 455 VL+R++ QG + L+E S++ Sbjct: 374 SKPVLERIKLFQGNLFLLETLTSDE 398 >ref|XP_002515683.1| conserved hypothetical protein [Ricinus communis] gi|223545226|gb|EEF46735.1| conserved hypothetical protein [Ricinus communis] Length = 2429 Score = 85.9 bits (211), Expect = 3e-15 Identities = 56/153 (36%), Positives = 86/153 (56%), Gaps = 2/153 (1%) Frame = +3 Query: 3 DLDVDLVSFSPQLEGFDSTLKGCEGPLTTPKVVISPQSKCIAALDSTGGLDVFELHEERS 182 ++D++L+S S Q EG K G + PKV++SP+ +A LD +G L +F+L +E+S Sbjct: 258 NVDLELLS-SVQFEGLYHKSKDFLGQIAYPKVLMSPEGNFVATLDISGCLYIFKLDKEQS 316 Query: 183 SLSIVDLSHSGLSQTAKCSIGKRK-FVKDITDFTWWSDRVLIIAKVSGVDDP-DIFTGKS 356 SLS + + SQ + K F+ D DFTWWSD ++ +A+ GV +I G Sbjct: 317 SLSSIAVGGRFGSQVIDNLTNRHKEFLNDNIDFTWWSDHIVTLARRGGVFTMLNILAGLQ 376 Query: 357 LLEDDPKFCMLVLQRVQQCQGCVLLMELSPSEK 455 L + D + M VL RVQ+ QG + L+E E+ Sbjct: 377 LQKSDHIYSMPVLDRVQKLQGHLFLVESKSFEE 409