BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032939
         (616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271735.2| PREDICTED: uncharacterized protein LOC100254...   261   7e-68
emb|CBI32346.3| unnamed protein product [Vitis vinifera]              261   7e-68
ref|XP_004158628.1| PREDICTED: mediator of RNA polymerase II tra...   232   3e-59
ref|XP_004140216.1| PREDICTED: mediator of RNA polymerase II tra...   232   3e-59
ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247...   227   1e-57

>ref|XP_002271735.2| PREDICTED: uncharacterized protein LOC100254459 [Vitis vinifera]
          Length = 1321

 Score =  261 bits (667), Expect = 7e-68
 Identities = 124/180 (68%), Positives = 147/180 (81%)
 Frame = +1

Query: 76  GIWENVLELTKNAQSKGIEPLHWATQLSSTLNSAAVSLPSIELAHLLVSHICWENNIPIT 255
           G+W++VLELTK+AQ +  +PL WA QLSS LNSA  SLPS ELAHLLVSHICW NN+PIT
Sbjct: 18  GLWDSVLELTKSAQERNSDPLLWAVQLSSILNSAGTSLPSPELAHLLVSHICWANNVPIT 77

Query: 256 WKFLEKALTGKLVPPMLVLALLSSRVIPSRRHRPGAFRLYMELLKRYAFSFKSQIHDPNY 435
           WKFLEKA++G++ PPMLVLALLSSRVIP+RR  P A+RLYMELLKR+ FSF S+I+ PNY
Sbjct: 78  WKFLEKAVSGRIAPPMLVLALLSSRVIPNRRLYPAAYRLYMELLKRHTFSFTSEINGPNY 137

Query: 436 QKIMKSVDEILHLSEIFGLRVCEPGTLVVEYVFSIVWQXXXXXXXXXXXXXQTPEKKSKW 615
           QKIMKS+D++LHLS+IFGL+VCEPG LVVE++FSIVWQ               PEKKSKW
Sbjct: 138 QKIMKSIDDVLHLSQIFGLQVCEPGALVVEFIFSIVWQLLDASLDDEGLLELAPEKKSKW 197


>emb|CBI32346.3| unnamed protein product [Vitis vinifera]
          Length = 1388

 Score =  261 bits (667), Expect = 7e-68
 Identities = 124/180 (68%), Positives = 147/180 (81%)
 Frame = +1

Query: 76  GIWENVLELTKNAQSKGIEPLHWATQLSSTLNSAAVSLPSIELAHLLVSHICWENNIPIT 255
           G+W++VLELTK+AQ +  +PL WA QLSS LNSA  SLPS ELAHLLVSHICW NN+PIT
Sbjct: 69  GLWDSVLELTKSAQERNSDPLLWAVQLSSILNSAGTSLPSPELAHLLVSHICWANNVPIT 128

Query: 256 WKFLEKALTGKLVPPMLVLALLSSRVIPSRRHRPGAFRLYMELLKRYAFSFKSQIHDPNY 435
           WKFLEKA++G++ PPMLVLALLSSRVIP+RR  P A+RLYMELLKR+ FSF S+I+ PNY
Sbjct: 129 WKFLEKAVSGRIAPPMLVLALLSSRVIPNRRLYPAAYRLYMELLKRHTFSFTSEINGPNY 188

Query: 436 QKIMKSVDEILHLSEIFGLRVCEPGTLVVEYVFSIVWQXXXXXXXXXXXXXQTPEKKSKW 615
           QKIMKS+D++LHLS+IFGL+VCEPG LVVE++FSIVWQ               PEKKSKW
Sbjct: 189 QKIMKSIDDVLHLSQIFGLQVCEPGALVVEFIFSIVWQLLDASLDDEGLLELAPEKKSKW 248


>ref|XP_004158628.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           33B-like [Cucumis sativus]
          Length = 739

 Score =  232 bits (592), Expect = 3e-59
 Identities = 108/180 (60%), Positives = 139/180 (77%)
 Frame = +1

Query: 76  GIWENVLELTKNAQSKGIEPLHWATQLSSTLNSAAVSLPSIELAHLLVSHICWENNIPIT 255
           G+W+ VLELTK+AQ K  +PL WA QLSSTLNSA VSLPS+ELA LLVSHICW+N++PI 
Sbjct: 16  GLWDTVLELTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQLLVSHICWDNHVPIM 75

Query: 256 WKFLEKALTGKLVPPMLVLALLSSRVIPSRRHRPGAFRLYMELLKRYAFSFKSQIHDPNY 435
           WKFLEKA+T ++VPP+LV+ALLS+R IP R+ +P A+RLY+ELL R+ FS   QI+ PNY
Sbjct: 76  WKFLEKAMTARIVPPLLVIALLSTRAIPYRKLQPAAYRLYLELLSRHVFSSTCQIYGPNY 135

Query: 436 QKIMKSVDEILHLSEIFGLRVCEPGTLVVEYVFSIVWQXXXXXXXXXXXXXQTPEKKSKW 615
           Q+IM+++D++LHL++IFGL+ CEPG L+VE  FSIVWQ                E+KS W
Sbjct: 136 QRIMQTIDDVLHLTQIFGLQTCEPGVLMVELFFSIVWQLLDASLDDEGLLALHGEEKSAW 195


>ref|XP_004140216.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           33A-like [Cucumis sativus]
          Length = 1335

 Score =  232 bits (592), Expect = 3e-59
 Identities = 108/180 (60%), Positives = 139/180 (77%)
 Frame = +1

Query: 76  GIWENVLELTKNAQSKGIEPLHWATQLSSTLNSAAVSLPSIELAHLLVSHICWENNIPIT 255
           G+W+ VLELTK+AQ K  +PL WA QLSSTLNSA VSLPS+ELA LLVSHICW+N++PI 
Sbjct: 16  GLWDTVLELTKSAQDKNCDPLLWAVQLSSTLNSAGVSLPSVELAQLLVSHICWDNHVPIM 75

Query: 256 WKFLEKALTGKLVPPMLVLALLSSRVIPSRRHRPGAFRLYMELLKRYAFSFKSQIHDPNY 435
           WKFLEKA+T ++VPP+LV+ALLS+R IP R+ +P A+RLY+ELL R+ FS   QI+ PNY
Sbjct: 76  WKFLEKAMTARIVPPLLVIALLSTRAIPYRKLQPAAYRLYLELLSRHVFSSTCQIYGPNY 135

Query: 436 QKIMKSVDEILHLSEIFGLRVCEPGTLVVEYVFSIVWQXXXXXXXXXXXXXQTPEKKSKW 615
           Q+IM+++D++LHL++IFGL+ CEPG L+VE  FSIVWQ                E+KS W
Sbjct: 136 QRIMQTIDDVLHLTQIFGLQTCEPGVLMVELFFSIVWQLLDASLDDEGLLALHGEEKSAW 195


>ref|XP_002277484.1| PREDICTED: uncharacterized protein LOC100247741 [Vitis vinifera]
           gi|297736973|emb|CBI26174.3| unnamed protein product
           [Vitis vinifera]
          Length = 1305

 Score =  227 bits (578), Expect = 1e-57
 Identities = 113/179 (63%), Positives = 135/179 (75%)
 Frame = +1

Query: 79  IWENVLELTKNAQSKGIEPLHWATQLSSTLNSAAVSLPSIELAHLLVSHICWENNIPITW 258
           IW+N+LE T  AQ KG +PL WA QLSS+L+SA VSLPS+E+A+LLVSHICW NN+PI W
Sbjct: 9   IWDNILEHTNVAQEKGSDPLLWAVQLSSSLSSAGVSLPSVEVANLLVSHICWGNNVPIAW 68

Query: 259 KFLEKALTGKLVPPMLVLALLSSRVIPSRRHRPGAFRLYMELLKRYAFSFKSQIHDPNYQ 438
           KFLEKAL  K+VPPM VLALLS+RVIPSR  RP A+RLY+EL+KR+AF+ KS I  PNYQ
Sbjct: 69  KFLEKALMIKIVPPMPVLALLSTRVIPSRHSRPTAYRLYLELIKRHAFTLKSLIDGPNYQ 128

Query: 439 KIMKSVDEILHLSEIFGLRVCEPGTLVVEYVFSIVWQXXXXXXXXXXXXXQTPEKKSKW 615
           K MK +D +LHLS  FGL+  EPG LVVE++FS+V                TPEKKSKW
Sbjct: 129 KDMKFIDSVLHLSLAFGLQASEPGILVVEFIFSMVLMLLDASLDDEGLIELTPEKKSKW 187