BLASTX nr result

ID: Coptis24_contig00032928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032928
         (311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312735.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34
ref|XP_004165845.1| PREDICTED: uncharacterized LOC101204674 [Cuc...   148   5e-34
ref|XP_004134461.1| PREDICTED: uncharacterized protein LOC101204...   148   5e-34
ref|XP_003528668.1| PREDICTED: uncharacterized protein LOC100780...   146   2e-33
ref|XP_002314424.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33

>ref|XP_002312735.1| predicted protein [Populus trichocarpa] gi|222852555|gb|EEE90102.1|
           predicted protein [Populus trichocarpa]
          Length = 827

 Score =  150 bits (378), Expect = 1e-34
 Identities = 76/103 (73%), Positives = 88/103 (85%)
 Frame = +3

Query: 3   GKALRQEISEIVFTISNIRDILRYGEKHPTLQELGIEILTSLALGDEATERIGCTGGVLK 182
           G  LR+EISE+VFT+SNIRDILR+GEKHP LQ+LGIEILTSLAL ++ATERIG  GGVLK
Sbjct: 537 GNHLRREISEMVFTVSNIRDILRHGEKHPMLQKLGIEILTSLALEEDATERIGGAGGVLK 596

Query: 183 ELFYIFFNKEIPGAQNRVRVAAGEALAMLVFESEKNCRRVLKL 311
           ELF IFF++ IP  QN VR+AAGEALAML  ES +NC R+LKL
Sbjct: 597 ELFNIFFSQRIPENQNHVRIAAGEALAMLALESRRNCLRILKL 639


>ref|XP_004165845.1| PREDICTED: uncharacterized LOC101204674 [Cucumis sativus]
          Length = 826

 Score =  148 bits (373), Expect = 5e-34
 Identities = 74/103 (71%), Positives = 87/103 (84%)
 Frame = +3

Query: 3   GKALRQEISEIVFTISNIRDILRYGEKHPTLQELGIEILTSLALGDEATERIGCTGGVLK 182
           GK LR EI+EIVFTISNIRD+LRYG+KHP+LQ+LGIEILTSLAL ++ATE IG TG VLK
Sbjct: 536 GKFLRNEIAEIVFTISNIRDVLRYGDKHPSLQKLGIEILTSLALDEDATESIGGTGSVLK 595

Query: 183 ELFYIFFNKEIPGAQNRVRVAAGEALAMLVFESEKNCRRVLKL 311
           ELF IFFN+E+    NR R+AAGEALAML  +S+ NC R+LKL
Sbjct: 596 ELFRIFFNQEMGEIHNRTRIAAGEALAMLALDSKSNCNRILKL 638


>ref|XP_004134461.1| PREDICTED: uncharacterized protein LOC101204674 [Cucumis sativus]
          Length = 826

 Score =  148 bits (373), Expect = 5e-34
 Identities = 74/103 (71%), Positives = 87/103 (84%)
 Frame = +3

Query: 3   GKALRQEISEIVFTISNIRDILRYGEKHPTLQELGIEILTSLALGDEATERIGCTGGVLK 182
           GK LR EI+EIVFTISNIRD+LRYG+KHP+LQ+LGIEILTSLAL ++ATE IG TG VLK
Sbjct: 536 GKFLRNEIAEIVFTISNIRDVLRYGDKHPSLQKLGIEILTSLALDEDATESIGGTGSVLK 595

Query: 183 ELFYIFFNKEIPGAQNRVRVAAGEALAMLVFESEKNCRRVLKL 311
           ELF IFFN+E+    NR R+AAGEALAML  +S+ NC R+LKL
Sbjct: 596 ELFRIFFNQEMGEIHNRTRIAAGEALAMLALDSKSNCNRILKL 638


>ref|XP_003528668.1| PREDICTED: uncharacterized protein LOC100780321 [Glycine max]
          Length = 787

 Score =  146 bits (368), Expect = 2e-33
 Identities = 76/103 (73%), Positives = 84/103 (81%)
 Frame = +3

Query: 3   GKALRQEISEIVFTISNIRDILRYGEKHPTLQELGIEILTSLALGDEATERIGCTGGVLK 182
           GK LR+EISEIVFTIS IRDILRYGEKHP LQ+L IEILTSLAL ++ATERIG TGGVLK
Sbjct: 498 GKHLRREISEIVFTISYIRDILRYGEKHPLLQKLSIEILTSLALEEDATERIGGTGGVLK 557

Query: 183 ELFYIFFNKEIPGAQNRVRVAAGEALAMLVFESEKNCRRVLKL 311
           ELF IFF   IP  Q  V++ AGEALAML  ES+ NC R+LKL
Sbjct: 558 ELFNIFFKHNIPENQKHVKIVAGEALAMLALESKSNCHRILKL 600


>ref|XP_002314424.1| predicted protein [Populus trichocarpa] gi|222863464|gb|EEF00595.1|
           predicted protein [Populus trichocarpa]
          Length = 826

 Score =  145 bits (366), Expect = 3e-33
 Identities = 75/103 (72%), Positives = 86/103 (83%)
 Frame = +3

Query: 3   GKALRQEISEIVFTISNIRDILRYGEKHPTLQELGIEILTSLALGDEATERIGCTGGVLK 182
           G  LR+EISEIVFTISNIRDILR+GEKHP LQ+L IEILTSLAL ++A ERIG TGGVLK
Sbjct: 536 GNNLRREISEIVFTISNIRDILRHGEKHPMLQKLSIEILTSLALEEDAKERIGGTGGVLK 595

Query: 183 ELFYIFFNKEIPGAQNRVRVAAGEALAMLVFESEKNCRRVLKL 311
           ELF IFF++ IP  QN  R+AAG+ALAML  ES +NC R+LKL
Sbjct: 596 ELFNIFFSQGIPENQNHARIAAGDALAMLALESRRNCLRILKL 638


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