BLASTX nr result

ID: Coptis24_contig00032924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032924
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310496.1| predicted protein [Populus trichocarpa] gi|2...   165   3e-39
ref|XP_002522617.1| conserved hypothetical protein [Ricinus comm...   160   1e-37
ref|XP_002323957.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36
emb|CBI38223.3| unnamed protein product [Vitis vinifera]              155   3e-36
ref|XP_002269775.1| PREDICTED: uncharacterized protein LOC100267...   155   3e-36

>ref|XP_002310496.1| predicted protein [Populus trichocarpa] gi|222853399|gb|EEE90946.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  165 bits (418), Expect = 3e-39
 Identities = 75/99 (75%), Positives = 88/99 (88%)
 Frame = -1

Query: 297 NCSPQLNSMITKLRQAVTFLPLKDLRYSNTALQGHTWFMSSMYDKQEEGEVQYQYFPSQE 118
           NC+ +L SM  KLRQAVTFLPLKDLRY++TA +GHTWFMSSM+D +EEGEVQYQ FPS+ 
Sbjct: 46  NCTQELESMAEKLRQAVTFLPLKDLRYADTAPEGHTWFMSSMHDTREEGEVQYQQFPSES 105

Query: 117 SQGRLLCIKGNDTHDGSWNSYALAWEDALPFNATLLEGL 1
           S+GRLLC+KG +THDGSWNSYALAW +ALP NATLL+GL
Sbjct: 106 SKGRLLCLKGKETHDGSWNSYALAWPEALPINATLLKGL 144


>ref|XP_002522617.1| conserved hypothetical protein [Ricinus communis]
           gi|223538093|gb|EEF39704.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 487

 Score =  160 bits (404), Expect = 1e-37
 Identities = 74/99 (74%), Positives = 84/99 (84%), Gaps = 1/99 (1%)
 Frame = -1

Query: 294 CSPQLNSMIT-KLRQAVTFLPLKDLRYSNTALQGHTWFMSSMYDKQEEGEVQYQYFPSQE 118
           C+ +L SM   +L+QAVTFLPLKD+RY   ALQGHTWFMSSMYD  EEGEVQYQ FPS+ 
Sbjct: 79  CNQELKSMAEMRLKQAVTFLPLKDIRYQEKALQGHTWFMSSMYDTHEEGEVQYQQFPSES 138

Query: 117 SQGRLLCIKGNDTHDGSWNSYALAWEDALPFNATLLEGL 1
           S+GRLLC+KGNDTHDGSWNSYALAW + LP NATLL+GL
Sbjct: 139 SKGRLLCLKGNDTHDGSWNSYALAWPETLPLNATLLKGL 177


>ref|XP_002323957.1| predicted protein [Populus trichocarpa] gi|222866959|gb|EEF04090.1|
           predicted protein [Populus trichocarpa]
          Length = 462

 Score =  157 bits (396), Expect = 1e-36
 Identities = 72/99 (72%), Positives = 84/99 (84%)
 Frame = -1

Query: 297 NCSPQLNSMITKLRQAVTFLPLKDLRYSNTALQGHTWFMSSMYDKQEEGEVQYQYFPSQE 118
           NC+ +  SM  KLRQ+VTFLPLKDLRY++ A QGHTWFMSS YD +EEG VQYQ FPS+ 
Sbjct: 52  NCTQEHGSMAEKLRQSVTFLPLKDLRYADKARQGHTWFMSSTYDTREEGGVQYQQFPSES 111

Query: 117 SQGRLLCIKGNDTHDGSWNSYALAWEDALPFNATLLEGL 1
           S+ RLLC+KG +THDGSWNSYALAW +ALPFNATLL+GL
Sbjct: 112 SKRRLLCLKGKETHDGSWNSYALAWPEALPFNATLLKGL 150


>emb|CBI38223.3| unnamed protein product [Vitis vinifera]
          Length = 471

 Score =  155 bits (392), Expect = 3e-36
 Identities = 72/99 (72%), Positives = 83/99 (83%)
 Frame = -1

Query: 297 NCSPQLNSMITKLRQAVTFLPLKDLRYSNTALQGHTWFMSSMYDKQEEGEVQYQYFPSQE 118
           NCS +L+++  KL  AVTFLPLKDLRY+ TA QGHTWFMSSM+D + EGEVQYQ +PS  
Sbjct: 86  NCSHELHALAEKLSDAVTFLPLKDLRYAQTAQQGHTWFMSSMHDTRVEGEVQYQQYPSAA 145

Query: 117 SQGRLLCIKGNDTHDGSWNSYALAWEDALPFNATLLEGL 1
           S+GRLLCIKG DTHDG WNSYALAW DALP NAT+L+GL
Sbjct: 146 SRGRLLCIKGRDTHDGVWNSYALAWRDALPRNATVLKGL 184


>ref|XP_002269775.1| PREDICTED: uncharacterized protein LOC100267753 [Vitis vinifera]
          Length = 491

 Score =  155 bits (392), Expect = 3e-36
 Identities = 72/99 (72%), Positives = 83/99 (83%)
 Frame = -1

Query: 297 NCSPQLNSMITKLRQAVTFLPLKDLRYSNTALQGHTWFMSSMYDKQEEGEVQYQYFPSQE 118
           NCS +L+++  KL  AVTFLPLKDLRY+ TA QGHTWFMSSM+D + EGEVQYQ +PS  
Sbjct: 86  NCSHELHALAEKLSDAVTFLPLKDLRYAQTAQQGHTWFMSSMHDTRVEGEVQYQQYPSAA 145

Query: 117 SQGRLLCIKGNDTHDGSWNSYALAWEDALPFNATLLEGL 1
           S+GRLLCIKG DTHDG WNSYALAW DALP NAT+L+GL
Sbjct: 146 SRGRLLCIKGRDTHDGVWNSYALAWRDALPRNATVLKGL 184


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