BLASTX nr result

ID: Coptis24_contig00032917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032917
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003559870.1| PREDICTED: uncharacterized protein LOC100832...   103   2e-20
ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [S...    98   8e-19
ref|XP_002467194.1| hypothetical protein SORBIDRAFT_01g021220 [S...    98   8e-19
gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japon...    97   1e-18
ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group] g...    97   1e-18

>ref|XP_003559870.1| PREDICTED: uncharacterized protein LOC100832196 [Brachypodium
           distachyon]
          Length = 1451

 Score =  103 bits (256), Expect = 2e-20
 Identities = 43/87 (49%), Positives = 56/87 (64%)
 Frame = +2

Query: 2   KRGLPHAHXXXXXXXXXKFGTPDDYDSVVRAEIPDLDSEPVLYDLVKRHMIHGPCGYLKT 181
           KRGLPHAH         K   P+ YD ++ AE+PD +  P LY +V +HM+HGPCG LK 
Sbjct: 716 KRGLPHAHFLLIMDSKYKLTMPEQYDCLISAELPDKNKYPELYTMVVKHMMHGPCGVLKP 775

Query: 182 DAVCMKDGFCKKKYPKEFAEVTVQGND 262
           + +CMKDG CK +YP+ F   T+QG D
Sbjct: 776 NNICMKDGLCKNRYPRPFNSTTIQGKD 802


>ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [Sorghum bicolor]
            gi|241946122|gb|EES19267.1| hypothetical protein
            SORBIDRAFT_09g008040 [Sorghum bicolor]
          Length = 1679

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/87 (51%), Positives = 53/87 (60%)
 Frame = +2

Query: 2    KRGLPHAHXXXXXXXXXKFGTPDDYDSVVRAEIPDLDSEPVLYDLVKRHMIHGPCGYLKT 181
            KRGLPH H         K  TPD YD V+ AEIPD D  P L+DLV  HM+HGPCG L  
Sbjct: 761  KRGLPHEHLLLIMKSGSKLTTPDAYDRVISAEIPDKDKYPDLHDLVISHMLHGPCGVLNK 820

Query: 182  DAVCMKDGFCKKKYPKEFAEVTVQGND 262
               CM +  C+ +YP++F E T QGND
Sbjct: 821  KCACMVNEECRFQYPRQFCEATQQGND 847


>ref|XP_002467194.1| hypothetical protein SORBIDRAFT_01g021220 [Sorghum bicolor]
            gi|241921048|gb|EER94192.1| hypothetical protein
            SORBIDRAFT_01g021220 [Sorghum bicolor]
          Length = 1439

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/87 (51%), Positives = 53/87 (60%)
 Frame = +2

Query: 2    KRGLPHAHXXXXXXXXXKFGTPDDYDSVVRAEIPDLDSEPVLYDLVKRHMIHGPCGYLKT 181
            KRGLPH H         K  TPD YD V+ AEIPD D  P L+DLV  HM+HGPCG L  
Sbjct: 762  KRGLPHEHLLLIMKSGSKLTTPDAYDRVISAEIPDKDKYPDLHDLVISHMLHGPCGVLNK 821

Query: 182  DAVCMKDGFCKKKYPKEFAEVTVQGND 262
               CM +  C+ +YP++F E T QGND
Sbjct: 822  KCACMVNEECRFQYPRQFCEATQQGND 848


>gb|AAM92800.1| putative DNA helicase homolog [Oryza sativa Japonica Group]
          Length = 1443

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 41/87 (47%), Positives = 55/87 (63%)
 Frame = +2

Query: 2   KRGLPHAHXXXXXXXXXKFGTPDDYDSVVRAEIPDLDSEPVLYDLVKRHMIHGPCGYLKT 181
           KRGLPHAH         K  +P+ YD ++ AE+P+    P LY++V +HM+HGPCG L  
Sbjct: 523 KRGLPHAHFLLIMDGKYKLTSPEQYDCIISAELPNKHKYPELYEMVVKHMMHGPCGTLNR 582

Query: 182 DAVCMKDGFCKKKYPKEFAEVTVQGND 262
             VCM+DG CK +YP+ F  VT+ G D
Sbjct: 583 KNVCMQDGSCKNRYPRAFNAVTINGKD 609


>ref|NP_001064280.2| Os10g0192300 [Oryza sativa Japonica Group]
           gi|255679265|dbj|BAF26194.2| Os10g0192300 [Oryza sativa
           Japonica Group]
          Length = 1575

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 41/87 (47%), Positives = 55/87 (63%)
 Frame = +2

Query: 2   KRGLPHAHXXXXXXXXXKFGTPDDYDSVVRAEIPDLDSEPVLYDLVKRHMIHGPCGYLKT 181
           KRGLPHAH         K  +P+ YD ++ AE+P+    P LY++V +HM+HGPCG L  
Sbjct: 682 KRGLPHAHFLLIMDGKYKLTSPEQYDCIISAELPNKHKYPELYEMVVKHMMHGPCGTLNR 741

Query: 182 DAVCMKDGFCKKKYPKEFAEVTVQGND 262
             VCM+DG CK +YP+ F  VT+ G D
Sbjct: 742 KNVCMQDGSCKNRYPRAFNAVTINGKD 768


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