BLASTX nr result

ID: Coptis24_contig00032885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032885
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269108.2| PREDICTED: glucan endo-1,3-beta-glucosidase ...   204   8e-51
emb|CBI28434.3| unnamed protein product [Vitis vinifera]              204   8e-51
ref|XP_002313970.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-46
ref|XP_004143223.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   186   2e-45
ref|XP_003552935.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   176   2e-42

>ref|XP_002269108.2| PREDICTED: glucan endo-1,3-beta-glucosidase 9-like [Vitis vinifera]
          Length = 485

 Score =  204 bits (518), Expect = 8e-51
 Identities = 94/126 (74%), Positives = 112/126 (88%)
 Frame = -2

Query: 380 LNKTMNQLLTFLSKHQSPFFINIYPFLSIHQNKNTSLDFALFKPTAHSLNDSHRTYKNSF 201
           LNKTM+ LLTFL+KH SPFF+NI PFLS+HQNKN SLDF++FK TAH  +DSHRTYKNSF
Sbjct: 183 LNKTMSHLLTFLNKHHSPFFVNISPFLSLHQNKNISLDFSIFKETAHPHSDSHRTYKNSF 242

Query: 200 DLSFDTLVTALSKVGFPDIEIVVGQIGWPTDGALNASSSIAQNFMKGLVDHLQSRLGTPL 21
           DL +DT+VTALS VG+P+++IVVGQIGWPTDGA NA+SS+A+ FMKGL+ HLQS+ GTPL
Sbjct: 243 DLIYDTVVTALSTVGYPEMDIVVGQIGWPTDGAANATSSVAETFMKGLIRHLQSKSGTPL 302

Query: 20  RPRKPP 3
           RPR PP
Sbjct: 303 RPRVPP 308


>emb|CBI28434.3| unnamed protein product [Vitis vinifera]
          Length = 873

 Score =  204 bits (518), Expect = 8e-51
 Identities = 94/126 (74%), Positives = 112/126 (88%)
 Frame = -2

Query: 380 LNKTMNQLLTFLSKHQSPFFINIYPFLSIHQNKNTSLDFALFKPTAHSLNDSHRTYKNSF 201
           LNKTM+ LLTFL+KH SPFF+NI PFLS+HQNKN SLDF++FK TAH  +DSHRTYKNSF
Sbjct: 183 LNKTMSHLLTFLNKHHSPFFVNISPFLSLHQNKNISLDFSIFKETAHPHSDSHRTYKNSF 242

Query: 200 DLSFDTLVTALSKVGFPDIEIVVGQIGWPTDGALNASSSIAQNFMKGLVDHLQSRLGTPL 21
           DL +DT+VTALS VG+P+++IVVGQIGWPTDGA NA+SS+A+ FMKGL+ HLQS+ GTPL
Sbjct: 243 DLIYDTVVTALSTVGYPEMDIVVGQIGWPTDGAANATSSVAETFMKGLIRHLQSKSGTPL 302

Query: 20  RPRKPP 3
           RPR PP
Sbjct: 303 RPRVPP 308


>ref|XP_002313970.1| predicted protein [Populus trichocarpa] gi|222850378|gb|EEE87925.1|
           predicted protein [Populus trichocarpa]
          Length = 480

 Score =  189 bits (480), Expect = 2e-46
 Identities = 87/126 (69%), Positives = 103/126 (81%)
 Frame = -2

Query: 380 LNKTMNQLLTFLSKHQSPFFINIYPFLSIHQNKNTSLDFALFKPTAHSLNDSHRTYKNSF 201
           LNKTM +LLTFL+KH SPFF  I PF+  H+NKN SLDF+LFK T HS ND HRTYKNSF
Sbjct: 180 LNKTMTELLTFLTKHHSPFFATISPFIISHRNKNISLDFSLFKETKHSRNDGHRTYKNSF 239

Query: 200 DLSFDTLVTALSKVGFPDIEIVVGQIGWPTDGALNASSSIAQNFMKGLVDHLQSRLGTPL 21
           DL +DTLV+ALS  GFP++++VV +IGWPTDGA NA+ S A+ FMKGL+DHL S+ GTPL
Sbjct: 240 DLGYDTLVSALSTAGFPEMDVVVAKIGWPTDGAANATPSAAETFMKGLMDHLHSKSGTPL 299

Query: 20  RPRKPP 3
           RPR PP
Sbjct: 300 RPRNPP 305


>ref|XP_004143223.1| PREDICTED: glucan endo-1,3-beta-glucosidase 9-like [Cucumis
           sativus] gi|449505192|ref|XP_004162402.1| PREDICTED:
           glucan endo-1,3-beta-glucosidase 9-like [Cucumis
           sativus]
          Length = 489

 Score =  186 bits (472), Expect = 2e-45
 Identities = 90/126 (71%), Positives = 106/126 (84%)
 Frame = -2

Query: 380 LNKTMNQLLTFLSKHQSPFFINIYPFLSIHQNKNTSLDFALFKPTAHSLNDSHRTYKNSF 201
           LNKTM QLLTFL+ H+SPFF +I PFLS  QNKN SLDFALFK TA   NDSHRTYKNSF
Sbjct: 187 LNKTMIQLLTFLTAHRSPFFASISPFLSFLQNKNISLDFALFKETARPHNDSHRTYKNSF 246

Query: 200 DLSFDTLVTALSKVGFPDIEIVVGQIGWPTDGALNASSSIAQNFMKGLVDHLQSRLGTPL 21
           +LS+DTLV +LSK+GF  ++IVV Q+GWPTDGA NA+SS A+ FMKGL+D+L SR G+PL
Sbjct: 247 ELSYDTLVASLSKIGFSTVDIVVEQVGWPTDGADNANSSTAETFMKGLLDYLHSRSGSPL 306

Query: 20  RPRKPP 3
           RPR+PP
Sbjct: 307 RPRRPP 312


>ref|XP_003552935.1| PREDICTED: glucan endo-1,3-beta-glucosidase 9-like [Glycine max]
          Length = 484

 Score =  176 bits (445), Expect = 2e-42
 Identities = 82/126 (65%), Positives = 102/126 (80%)
 Frame = -2

Query: 380 LNKTMNQLLTFLSKHQSPFFINIYPFLSIHQNKNTSLDFALFKPTAHSLNDSHRTYKNSF 201
           +NKTM +LLTFL KH SPFF+ I PF++  Q KN SLDF+LFK TA   N SH+TYKNSF
Sbjct: 185 INKTMIELLTFLDKHGSPFFVTISPFVTHLQTKNISLDFSLFKETARPHNFSHKTYKNSF 244

Query: 200 DLSFDTLVTALSKVGFPDIEIVVGQIGWPTDGALNASSSIAQNFMKGLVDHLQSRLGTPL 21
           DLS+DT+VT LS  G+P+++IVV +IGWPTDGA+N SS +A+ F+KGL++HL S LGTPL
Sbjct: 245 DLSYDTVVTVLSTAGYPNMDIVVAKIGWPTDGAVNGSSYLAETFIKGLINHLHSNLGTPL 304

Query: 20  RPRKPP 3
           RP KPP
Sbjct: 305 RPHKPP 310


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