BLASTX nr result

ID: Coptis24_contig00032882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032882
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23190.3| unnamed protein product [Vitis vinifera]               92   3e-17
emb|CAN68639.1| hypothetical protein VITISV_030806 [Vitis vinifera]    92   3e-17
ref|XP_002462938.1| hypothetical protein SORBIDRAFT_02g034920 [S...    92   4e-17
ref|XP_004158047.1| PREDICTED: tryptophan synthase beta chain 2,...    91   1e-16
ref|XP_004145103.1| PREDICTED: uncharacterized protein LOC101211...    91   1e-16

>emb|CBI23190.3| unnamed protein product [Vitis vinifera]
          Length = 1286

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 51/79 (64%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
 Frame = +3

Query: 66  MSWGLGWKRSTEIFHLTLLY-GDDENIEDGLRFXXXXXXXXXXXXINNNELGFRIELDWS 242
           MSWGLGWKR +EIFHLTL Y G DE +ED  R               + E GFRIELDW+
Sbjct: 1   MSWGLGWKRPSEIFHLTLNYSGGDEAVEDPGRSSS-----------EDQESGFRIELDWT 49

Query: 243 AGDDEDQVALRLQSQLMVA 299
           AGDDEDQVALRLQSQLMVA
Sbjct: 50  AGDDEDQVALRLQSQLMVA 68


>emb|CAN68639.1| hypothetical protein VITISV_030806 [Vitis vinifera]
          Length = 1286

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 51/79 (64%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
 Frame = +3

Query: 66  MSWGLGWKRSTEIFHLTLLY-GDDENIEDGLRFXXXXXXXXXXXXINNNELGFRIELDWS 242
           MSWGLGWKR +EIFHLTL Y G DE +ED  R               + E GFRIELDW+
Sbjct: 1   MSWGLGWKRPSEIFHLTLNYSGGDEAVEDPGRSSS-----------EDQESGFRIELDWT 49

Query: 243 AGDDEDQVALRLQSQLMVA 299
           AGDDEDQVALRLQSQLMVA
Sbjct: 50  AGDDEDQVALRLQSQLMVA 68


>ref|XP_002462938.1| hypothetical protein SORBIDRAFT_02g034920 [Sorghum bicolor]
           gi|241926315|gb|EER99459.1| hypothetical protein
           SORBIDRAFT_02g034920 [Sorghum bicolor]
          Length = 1279

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 51/94 (54%), Positives = 56/94 (59%), Gaps = 16/94 (17%)
 Frame = +3

Query: 66  MSWGLGWKRSTEIFHLTLLYGDDENIEDG----------------LRFXXXXXXXXXXXX 197
           MSWGLGWKRS+EIFHLTL YGD ++ +D                                
Sbjct: 1   MSWGLGWKRSSEIFHLTLDYGDYDDNDDNQPSSPPHPASSSPSASASSTPVSFSSPTAGC 60

Query: 198 INNNELGFRIELDWSAGDDEDQVALRLQSQLMVA 299
             N +LGFRIELDWSAGDDEDQVALRLQSQLMVA
Sbjct: 61  TRNGDLGFRIELDWSAGDDEDQVALRLQSQLMVA 94


>ref|XP_004158047.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like
           [Cucumis sativus]
          Length = 1563

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 49/86 (56%), Positives = 55/86 (63%), Gaps = 8/86 (9%)
 Frame = +3

Query: 66  MSWGLGWKRSTEIFHLTLLYGDDENIEDGLRFXXXXXXXXXXXXIN--------NNELGF 221
           MSWGLGWKR +EIFHL L YG +E+ E+  R              +          ELGF
Sbjct: 1   MSWGLGWKRPSEIFHLKLNYGSEEDAENPDRVSSSSSCSSSSSSSSAATTILTQGQELGF 60

Query: 222 RIELDWSAGDDEDQVALRLQSQLMVA 299
           RI+LDWSAGDDEDQVALRLQSQLMVA
Sbjct: 61  RIDLDWSAGDDEDQVALRLQSQLMVA 86


>ref|XP_004145103.1| PREDICTED: uncharacterized protein LOC101211840 [Cucumis sativus]
           gi|449471727|ref|XP_004153391.1| PREDICTED: tryptophan
           synthase beta chain 2, chloroplastic-like [Cucumis
           sativus]
          Length = 1328

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 49/86 (56%), Positives = 55/86 (63%), Gaps = 8/86 (9%)
 Frame = +3

Query: 66  MSWGLGWKRSTEIFHLTLLYGDDENIEDGLRFXXXXXXXXXXXXIN--------NNELGF 221
           MSWGLGWKR +EIFHL L YG +E+ E+  R              +          ELGF
Sbjct: 1   MSWGLGWKRPSEIFHLKLNYGSEEDAENPDRVSSSSSCSSSSSSSSAATTILTQGQELGF 60

Query: 222 RIELDWSAGDDEDQVALRLQSQLMVA 299
           RI+LDWSAGDDEDQVALRLQSQLMVA
Sbjct: 61  RIDLDWSAGDDEDQVALRLQSQLMVA 86