BLASTX nr result
ID: Coptis24_contig00032882
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032882 (299 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI23190.3| unnamed protein product [Vitis vinifera] 92 3e-17 emb|CAN68639.1| hypothetical protein VITISV_030806 [Vitis vinifera] 92 3e-17 ref|XP_002462938.1| hypothetical protein SORBIDRAFT_02g034920 [S... 92 4e-17 ref|XP_004158047.1| PREDICTED: tryptophan synthase beta chain 2,... 91 1e-16 ref|XP_004145103.1| PREDICTED: uncharacterized protein LOC101211... 91 1e-16 >emb|CBI23190.3| unnamed protein product [Vitis vinifera] Length = 1286 Score = 92.4 bits (228), Expect = 3e-17 Identities = 51/79 (64%), Positives = 55/79 (69%), Gaps = 1/79 (1%) Frame = +3 Query: 66 MSWGLGWKRSTEIFHLTLLY-GDDENIEDGLRFXXXXXXXXXXXXINNNELGFRIELDWS 242 MSWGLGWKR +EIFHLTL Y G DE +ED R + E GFRIELDW+ Sbjct: 1 MSWGLGWKRPSEIFHLTLNYSGGDEAVEDPGRSSS-----------EDQESGFRIELDWT 49 Query: 243 AGDDEDQVALRLQSQLMVA 299 AGDDEDQVALRLQSQLMVA Sbjct: 50 AGDDEDQVALRLQSQLMVA 68 >emb|CAN68639.1| hypothetical protein VITISV_030806 [Vitis vinifera] Length = 1286 Score = 92.4 bits (228), Expect = 3e-17 Identities = 51/79 (64%), Positives = 55/79 (69%), Gaps = 1/79 (1%) Frame = +3 Query: 66 MSWGLGWKRSTEIFHLTLLY-GDDENIEDGLRFXXXXXXXXXXXXINNNELGFRIELDWS 242 MSWGLGWKR +EIFHLTL Y G DE +ED R + E GFRIELDW+ Sbjct: 1 MSWGLGWKRPSEIFHLTLNYSGGDEAVEDPGRSSS-----------EDQESGFRIELDWT 49 Query: 243 AGDDEDQVALRLQSQLMVA 299 AGDDEDQVALRLQSQLMVA Sbjct: 50 AGDDEDQVALRLQSQLMVA 68 >ref|XP_002462938.1| hypothetical protein SORBIDRAFT_02g034920 [Sorghum bicolor] gi|241926315|gb|EER99459.1| hypothetical protein SORBIDRAFT_02g034920 [Sorghum bicolor] Length = 1279 Score = 92.0 bits (227), Expect = 4e-17 Identities = 51/94 (54%), Positives = 56/94 (59%), Gaps = 16/94 (17%) Frame = +3 Query: 66 MSWGLGWKRSTEIFHLTLLYGDDENIEDG----------------LRFXXXXXXXXXXXX 197 MSWGLGWKRS+EIFHLTL YGD ++ +D Sbjct: 1 MSWGLGWKRSSEIFHLTLDYGDYDDNDDNQPSSPPHPASSSPSASASSTPVSFSSPTAGC 60 Query: 198 INNNELGFRIELDWSAGDDEDQVALRLQSQLMVA 299 N +LGFRIELDWSAGDDEDQVALRLQSQLMVA Sbjct: 61 TRNGDLGFRIELDWSAGDDEDQVALRLQSQLMVA 94 >ref|XP_004158047.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like [Cucumis sativus] Length = 1563 Score = 90.5 bits (223), Expect = 1e-16 Identities = 49/86 (56%), Positives = 55/86 (63%), Gaps = 8/86 (9%) Frame = +3 Query: 66 MSWGLGWKRSTEIFHLTLLYGDDENIEDGLRFXXXXXXXXXXXXIN--------NNELGF 221 MSWGLGWKR +EIFHL L YG +E+ E+ R + ELGF Sbjct: 1 MSWGLGWKRPSEIFHLKLNYGSEEDAENPDRVSSSSSCSSSSSSSSAATTILTQGQELGF 60 Query: 222 RIELDWSAGDDEDQVALRLQSQLMVA 299 RI+LDWSAGDDEDQVALRLQSQLMVA Sbjct: 61 RIDLDWSAGDDEDQVALRLQSQLMVA 86 >ref|XP_004145103.1| PREDICTED: uncharacterized protein LOC101211840 [Cucumis sativus] gi|449471727|ref|XP_004153391.1| PREDICTED: tryptophan synthase beta chain 2, chloroplastic-like [Cucumis sativus] Length = 1328 Score = 90.5 bits (223), Expect = 1e-16 Identities = 49/86 (56%), Positives = 55/86 (63%), Gaps = 8/86 (9%) Frame = +3 Query: 66 MSWGLGWKRSTEIFHLTLLYGDDENIEDGLRFXXXXXXXXXXXXIN--------NNELGF 221 MSWGLGWKR +EIFHL L YG +E+ E+ R + ELGF Sbjct: 1 MSWGLGWKRPSEIFHLKLNYGSEEDAENPDRVSSSSSCSSSSSSSSAATTILTQGQELGF 60 Query: 222 RIELDWSAGDDEDQVALRLQSQLMVA 299 RI+LDWSAGDDEDQVALRLQSQLMVA Sbjct: 61 RIDLDWSAGDDEDQVALRLQSQLMVA 86