BLASTX nr result
ID: Coptis24_contig00032876
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032876 (540 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI37575.3| unnamed protein product [Vitis vinifera] 65 7e-09 ref|XP_002275533.1| PREDICTED: protein TONSOKU-like [Vitis vinif... 65 7e-09 ref|XP_003630220.1| Protein BRUSHY [Medicago truncatula] gi|3575... 60 2e-07 ref|XP_003532859.1| PREDICTED: protein TONSOKU-like [Glycine max] 59 5e-07 ref|XP_003524295.1| PREDICTED: protein TONSOKU-like [Glycine max] 59 6e-07 >emb|CBI37575.3| unnamed protein product [Vitis vinifera] Length = 1342 Score = 65.1 bits (157), Expect = 7e-09 Identities = 45/121 (37%), Positives = 56/121 (46%) Frame = +3 Query: 3 SITSRTIQKIADAMDPGFVLAQLCLGT*SLIADLSMLYRTLGF*VF*NVYET*HDNSISG 182 SITSRT+QK+ADA+D VLAQLCLG H+N ISG Sbjct: 977 SITSRTVQKVADALDSQSVLAQLCLG---------------------------HNNPISG 1009 Query: 183 NAIVNMLAKLMTLKR*ISIFFADYTFGSC*CKGSRFLFFSWLFCRFSELNLNGIKLSKPA 362 N+I+N++ KL TL+ RFSELNLNG+KLSK Sbjct: 1010 NSIMNLMGKLSTLE------------------------------RFSELNLNGLKLSKTV 1039 Query: 363 I 365 + Sbjct: 1040 V 1040 >ref|XP_002275533.1| PREDICTED: protein TONSOKU-like [Vitis vinifera] Length = 1309 Score = 65.1 bits (157), Expect = 7e-09 Identities = 45/121 (37%), Positives = 56/121 (46%) Frame = +3 Query: 3 SITSRTIQKIADAMDPGFVLAQLCLGT*SLIADLSMLYRTLGF*VF*NVYET*HDNSISG 182 SITSRT+QK+ADA+D VLAQLCLG H+N ISG Sbjct: 944 SITSRTVQKVADALDSQSVLAQLCLG---------------------------HNNPISG 976 Query: 183 NAIVNMLAKLMTLKR*ISIFFADYTFGSC*CKGSRFLFFSWLFCRFSELNLNGIKLSKPA 362 N+I+N++ KL TL+ RFSELNLNG+KLSK Sbjct: 977 NSIMNLMGKLSTLE------------------------------RFSELNLNGLKLSKTV 1006 Query: 363 I 365 + Sbjct: 1007 V 1007 >ref|XP_003630220.1| Protein BRUSHY [Medicago truncatula] gi|357519875|ref|XP_003630226.1| Protein BRUSHY [Medicago truncatula] gi|355524242|gb|AET04696.1| Protein BRUSHY [Medicago truncatula] gi|355524248|gb|AET04702.1| Protein BRUSHY [Medicago truncatula] Length = 1130 Score = 60.5 bits (145), Expect = 2e-07 Identities = 40/121 (33%), Positives = 57/121 (47%) Frame = +3 Query: 3 SITSRTIQKIADAMDPGFVLAQLCLGT*SLIADLSMLYRTLGF*VF*NVYET*HDNSISG 182 SITS+TIQKIADA+D G VL+ LC+G +++ ++G Sbjct: 983 SITSKTIQKIADALDSGSVLSHLCIG---------------------------YNHPVTG 1015 Query: 183 NAIVNMLAKLMTLKR*ISIFFADYTFGSC*CKGSRFLFFSWLFCRFSELNLNGIKLSKPA 362 NA+VN+L+KL TLK RFSELN++G+KL +P Sbjct: 1016 NAVVNLLSKLSTLK------------------------------RFSELNMSGLKLGRPV 1045 Query: 363 I 365 + Sbjct: 1046 V 1046 >ref|XP_003532859.1| PREDICTED: protein TONSOKU-like [Glycine max] Length = 1318 Score = 58.9 bits (141), Expect = 5e-07 Identities = 40/120 (33%), Positives = 55/120 (45%) Frame = +3 Query: 6 ITSRTIQKIADAMDPGFVLAQLCLGT*SLIADLSMLYRTLGF*VF*NVYET*HDNSISGN 185 +TSRTIQK+ADA+D VLA LC+G +++ +SGN Sbjct: 969 VTSRTIQKVADALDSTSVLAHLCIG---------------------------YNSPVSGN 1001 Query: 186 AIVNMLAKLMTLKR*ISIFFADYTFGSC*CKGSRFLFFSWLFCRFSELNLNGIKLSKPAI 365 AIVN+++KL TLK RFSELN++G+KL KP + Sbjct: 1002 AIVNLVSKLSTLK------------------------------RFSELNMSGLKLGKPVV 1031 >ref|XP_003524295.1| PREDICTED: protein TONSOKU-like [Glycine max] Length = 1301 Score = 58.5 bits (140), Expect = 6e-07 Identities = 39/120 (32%), Positives = 55/120 (45%) Frame = +3 Query: 6 ITSRTIQKIADAMDPGFVLAQLCLGT*SLIADLSMLYRTLGF*VF*NVYET*HDNSISGN 185 +TSRTIQK+ADA+D VLA LC+G +++ +SGN Sbjct: 971 VTSRTIQKVADALDSRSVLAHLCIG---------------------------YNSPVSGN 1003 Query: 186 AIVNMLAKLMTLKR*ISIFFADYTFGSC*CKGSRFLFFSWLFCRFSELNLNGIKLSKPAI 365 AI+N+L++L TLK RFSELN++G+KL KP + Sbjct: 1004 AIINLLSRLSTLK------------------------------RFSELNMSGLKLGKPVV 1033