BLASTX nr result

ID: Coptis24_contig00032876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032876
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37575.3| unnamed protein product [Vitis vinifera]               65   7e-09
ref|XP_002275533.1| PREDICTED: protein TONSOKU-like [Vitis vinif...    65   7e-09
ref|XP_003630220.1| Protein BRUSHY [Medicago truncatula] gi|3575...    60   2e-07
ref|XP_003532859.1| PREDICTED: protein TONSOKU-like [Glycine max]      59   5e-07
ref|XP_003524295.1| PREDICTED: protein TONSOKU-like [Glycine max]      59   6e-07

>emb|CBI37575.3| unnamed protein product [Vitis vinifera]
          Length = 1342

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 45/121 (37%), Positives = 56/121 (46%)
 Frame = +3

Query: 3    SITSRTIQKIADAMDPGFVLAQLCLGT*SLIADLSMLYRTLGF*VF*NVYET*HDNSISG 182
            SITSRT+QK+ADA+D   VLAQLCLG                           H+N ISG
Sbjct: 977  SITSRTVQKVADALDSQSVLAQLCLG---------------------------HNNPISG 1009

Query: 183  NAIVNMLAKLMTLKR*ISIFFADYTFGSC*CKGSRFLFFSWLFCRFSELNLNGIKLSKPA 362
            N+I+N++ KL TL+                              RFSELNLNG+KLSK  
Sbjct: 1010 NSIMNLMGKLSTLE------------------------------RFSELNLNGLKLSKTV 1039

Query: 363  I 365
            +
Sbjct: 1040 V 1040


>ref|XP_002275533.1| PREDICTED: protein TONSOKU-like [Vitis vinifera]
          Length = 1309

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 45/121 (37%), Positives = 56/121 (46%)
 Frame = +3

Query: 3    SITSRTIQKIADAMDPGFVLAQLCLGT*SLIADLSMLYRTLGF*VF*NVYET*HDNSISG 182
            SITSRT+QK+ADA+D   VLAQLCLG                           H+N ISG
Sbjct: 944  SITSRTVQKVADALDSQSVLAQLCLG---------------------------HNNPISG 976

Query: 183  NAIVNMLAKLMTLKR*ISIFFADYTFGSC*CKGSRFLFFSWLFCRFSELNLNGIKLSKPA 362
            N+I+N++ KL TL+                              RFSELNLNG+KLSK  
Sbjct: 977  NSIMNLMGKLSTLE------------------------------RFSELNLNGLKLSKTV 1006

Query: 363  I 365
            +
Sbjct: 1007 V 1007


>ref|XP_003630220.1| Protein BRUSHY [Medicago truncatula] gi|357519875|ref|XP_003630226.1|
            Protein BRUSHY [Medicago truncatula]
            gi|355524242|gb|AET04696.1| Protein BRUSHY [Medicago
            truncatula] gi|355524248|gb|AET04702.1| Protein BRUSHY
            [Medicago truncatula]
          Length = 1130

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 40/121 (33%), Positives = 57/121 (47%)
 Frame = +3

Query: 3    SITSRTIQKIADAMDPGFVLAQLCLGT*SLIADLSMLYRTLGF*VF*NVYET*HDNSISG 182
            SITS+TIQKIADA+D G VL+ LC+G                           +++ ++G
Sbjct: 983  SITSKTIQKIADALDSGSVLSHLCIG---------------------------YNHPVTG 1015

Query: 183  NAIVNMLAKLMTLKR*ISIFFADYTFGSC*CKGSRFLFFSWLFCRFSELNLNGIKLSKPA 362
            NA+VN+L+KL TLK                              RFSELN++G+KL +P 
Sbjct: 1016 NAVVNLLSKLSTLK------------------------------RFSELNMSGLKLGRPV 1045

Query: 363  I 365
            +
Sbjct: 1046 V 1046


>ref|XP_003532859.1| PREDICTED: protein TONSOKU-like [Glycine max]
          Length = 1318

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 40/120 (33%), Positives = 55/120 (45%)
 Frame = +3

Query: 6    ITSRTIQKIADAMDPGFVLAQLCLGT*SLIADLSMLYRTLGF*VF*NVYET*HDNSISGN 185
            +TSRTIQK+ADA+D   VLA LC+G                           +++ +SGN
Sbjct: 969  VTSRTIQKVADALDSTSVLAHLCIG---------------------------YNSPVSGN 1001

Query: 186  AIVNMLAKLMTLKR*ISIFFADYTFGSC*CKGSRFLFFSWLFCRFSELNLNGIKLSKPAI 365
            AIVN+++KL TLK                              RFSELN++G+KL KP +
Sbjct: 1002 AIVNLVSKLSTLK------------------------------RFSELNMSGLKLGKPVV 1031


>ref|XP_003524295.1| PREDICTED: protein TONSOKU-like [Glycine max]
          Length = 1301

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 39/120 (32%), Positives = 55/120 (45%)
 Frame = +3

Query: 6    ITSRTIQKIADAMDPGFVLAQLCLGT*SLIADLSMLYRTLGF*VF*NVYET*HDNSISGN 185
            +TSRTIQK+ADA+D   VLA LC+G                           +++ +SGN
Sbjct: 971  VTSRTIQKVADALDSRSVLAHLCIG---------------------------YNSPVSGN 1003

Query: 186  AIVNMLAKLMTLKR*ISIFFADYTFGSC*CKGSRFLFFSWLFCRFSELNLNGIKLSKPAI 365
            AI+N+L++L TLK                              RFSELN++G+KL KP +
Sbjct: 1004 AIINLLSRLSTLK------------------------------RFSELNMSGLKLGKPVV 1033


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