BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032865
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81094.1| RT6non-ltr [Cleome spinosa]                            127   7e-28
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                  124   6e-27
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   122   2e-26
ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777...   121   7e-26
ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811...   119   3e-25

>gb|ABW81094.1| RT6non-ltr [Cleome spinosa]
          Length = 459

 Score =  127 bits (320), Expect = 7e-28
 Identities = 55/151 (36%), Positives = 102/151 (67%)
 Frame = -1

Query: 455 PISPYLFVLVMEVLESIVKDKIEAKQIKYHSKCKKTNMSHLAFADDVLFFCRGEEESIRS 276
           P+SPYLF++ MEVL   +       Q++ HSKC    ++HL FADD++ F +   +S+++
Sbjct: 25  PLSPYLFIIAMEVLSRKLDQAASIGQLQLHSKCANPLLTHLIFADDLVIFSKASRQSMQA 84

Query: 275 LKDCLELFGQATGLQINKHKTTLMIGSISVYEAQALATILGVELVSPPVKYLGLPLFAGR 96
           +++CL  FG+ +GL++N  K  + +G ++  E Q L++ +G+ L + P+KYLGLP+   R
Sbjct: 85  VQNCLNWFGRNSGLEVNTGKCEMFLGGLTDSEKQELSSCMGITLGNFPMKYLGLPVNTHR 144

Query: 95  LGIKECQPLVDRVTAKLKDWKTRMLSHAGRL 3
           L   + +PL++++ AK+ +W +++LS+AG++
Sbjct: 145 LTKADYEPLLEKIRAKVSNWSSKLLSYAGKI 175


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score =  124 bits (312), Expect = 6e-27
 Identities = 62/151 (41%), Positives = 92/151 (60%)
 Frame = -1

Query: 455 PISPYLFVLVMEVLESIVKDKIEAKQIKYHSKCKKTNMSHLAFADDVLFFCRGEEESIRS 276
           P+SPYLF++ MEVL  ++       ++  H KC    ++HLAFADD++ F  GE  S+  
Sbjct: 108 PLSPYLFIMSMEVLSRMLDRCAAESRLSLHPKCHSPVITHLAFADDIMIFTSGETRSLLE 167

Query: 275 LKDCLELFGQATGLQINKHKTTLMIGSISVYEAQALATILGVELVSPPVKYLGLPLFAGR 96
           +K+ L+ F +A+GL +N  KT + +  ++  EA  L  ++G      PV+YLG+ L   R
Sbjct: 168 VKNTLDSFSRASGLYLNTEKTEIFLRGLNGTEASTLCAVIGFTRGYLPVRYLGVSLSPVR 227

Query: 95  LGIKECQPLVDRVTAKLKDWKTRMLSHAGRL 3
           L   + QPL+DRV AK+  W TR LS+AGRL
Sbjct: 228 LTKSDYQPLLDRVKAKINSWTTRYLSYAGRL 258


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  122 bits (307), Expect = 2e-26
 Identities = 63/151 (41%), Positives = 95/151 (62%)
 Frame = -1

Query: 455  PISPYLFVLVMEVLESIVKDKIEAKQIKYHSKCKKTNMSHLAFADDVLFFCRGEEESIRS 276
            P+SPYLFVL MEV   +++ +  +  I YH K  +  +SHL FADDV+ F  G+  S+  
Sbjct: 552  PMSPYLFVLAMEVFSGLLQSRYTSGYIAYHPKTSQLEISHLMFADDVMIFFDGKSSSLHG 611

Query: 275  LKDCLELFGQATGLQINKHKTTLMIGSISVYEAQALATILGVELVSPPVKYLGLPLFAGR 96
            + + LE F   +GL +N +KT L    +S  E+ ++A+  G +L S PV+YLGLPL + +
Sbjct: 612  IVESLEDFAGWSGLLMNTNKTQLYHAGLSQSESDSMAS-YGFKLGSLPVRYLGLPLMSRK 670

Query: 95   LGIKECQPLVDRVTAKLKDWKTRMLSHAGRL 3
            L I E  PL++++TA+   W  R+LS AGR+
Sbjct: 671  LTIAEYAPLIEKITARFNSWVVRLLSFAGRV 701


>ref|XP_003533176.1| PREDICTED: uncharacterized protein LOC100777167 [Glycine max]
          Length = 1324

 Score =  121 bits (303), Expect = 7e-26
 Identities = 55/151 (36%), Positives = 91/151 (60%)
 Frame = -1

Query: 455  PISPYLFVLVMEVLESIVKDKIEAKQIKYHSKCKKTNMSHLAFADDVLFFCRGEEESIRS 276
            P+SP LFV++ME +   +    +     +HSKC+K  +++L FADDVL FCRG+ +S+  
Sbjct: 853  PMSPMLFVIIMEYMHRTLVKMQQNPDFNHHSKCEKIGLTNLTFADDVLLFCRGDSKSVSM 912

Query: 275  LKDCLELFGQATGLQINKHKTTLMIGSISVYEAQALATILGVELVSPPVKYLGLPLFAGR 96
            + + +  F  +TGL++N  K  +  G +     + L  I        PV+YLG+PL   R
Sbjct: 913  MMETIRKFSDSTGLKVNPAKCQMFFGGMDGCSKENLRRITDFAEGKLPVRYLGMPLSCKR 972

Query: 95   LGIKECQPLVDRVTAKLKDWKTRMLSHAGRL 3
            L I++  PL+D++  ++K W +++LSHAGR+
Sbjct: 973  LTIQQYMPLIDKIVDRVKHWTSKLLSHAGRI 1003


>ref|XP_003543991.1| PREDICTED: uncharacterized protein LOC100811508 [Glycine max]
          Length = 1441

 Score =  119 bits (298), Expect = 3e-25
 Identities = 55/151 (36%), Positives = 91/151 (60%)
 Frame = -1

Query: 455  PISPYLFVLVMEVLESIVKDKIEAKQIKYHSKCKKTNMSHLAFADDVLFFCRGEEESIRS 276
            P+SP LFV++ME L   +    +     +HSKC+K  +++L FADDVL FCRG+ +S+  
Sbjct: 970  PMSPMLFVIIMEYLHRTLVKMQQNPDFNHHSKCEKIGLTNLTFADDVLLFCRGDSKSVSM 1029

Query: 275  LKDCLELFGQATGLQINKHKTTLMIGSISVYEAQALATILGVELVSPPVKYLGLPLFAGR 96
            + + +  F  +TGL++N  K  +  G +     + L  I        PV+YLG+PL   R
Sbjct: 1030 MMETIRKFSDSTGLKVNPAKCQMFFGGMDGCSKENLRRITDFAEGKLPVRYLGVPLSCKR 1089

Query: 95   LGIKECQPLVDRVTAKLKDWKTRMLSHAGRL 3
            L I++  PL+D++  ++K W +++LS+AGR+
Sbjct: 1090 LTIQQYMPLIDKIVDRVKHWTSKLLSYAGRI 1120