BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032851
         (821 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF81334.1|AC007767_14 Contains similarity to a hypothetical ...    59   2e-06

>gb|AAF81334.1|AC007767_14 Contains similarity to a hypothetical protein T25K17.150 gi|7487424
           from Arabidopsis thaliana BAC T25K17 gb|AL049171
           [Arabidopsis thaliana]
          Length = 536

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 18/230 (7%)
 Frame = +3

Query: 12  IELPDSLFTSAITSATLNS----LEPSAPSIKLPSSMCLATHLKTLKLISVVLPKGDLKG 179
           + LP SL+T      TL      L  +  S   PS       LKTL L+S+  P  +L  
Sbjct: 206 VVLPRSLYTCCRMLVTLKLNNAVLVDATSSFSFPS-------LKTLSLVSMKFPGDELIK 258

Query: 180 ELTFSCPLLEDLIVRNCDHEHLKSLNIFTLRLQSLVLENDRCITKNDKCQIKLCTPYLRS 359
            L  +CP+LEDL+V+ C ++++ +  +    L+ LVL      + N  C   + TP L  
Sbjct: 259 MLLSNCPVLEDLVVKRCPYDNVTTFTVRVSSLKCLVLHETELASINADCGFVIDTPSLEC 318

Query: 360 V----------VFKRDMYEDYSLGVLSCLV-TAELQLIIRGTQDAKGLIKILKVVCAAVR 506
           +          V + +M +     V +  V T +L   I   +     I   KV+C    
Sbjct: 319 LDIEDGRGGFCVIENNMTKVVKANVCNSYVHTQQLMGSISSVKRLYVCIPSSKVICFYSS 378

Query: 507 TLRLFYYPLFVGLSTLGRLPS---PLDNLRKLMIRIECRVTCFGEIVNLL 647
            + ++Y+ L   ++ +  L     P+ ++   ++R+    TC  E +NLL
Sbjct: 379 VIYIYYWFLCDQITYVVSLMQDAYPVGSVFHCLVRLTI-CTCETEWLNLL 427