BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032850
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146154.1| PREDICTED: F-box protein At4g35930-like [Cuc...    87   1e-15
ref|XP_003547917.1| PREDICTED: F-box protein At4g35930-like [Gly...    87   1e-15
ref|XP_002269563.2| PREDICTED: F-box protein At4g35930, partial ...    87   2e-15
emb|CAN71843.1| hypothetical protein VITISV_036263 [Vitis vinifera]    87   2e-15
ref|XP_002531155.1| conserved hypothetical protein [Ricinus comm...    86   4e-15

>ref|XP_004146154.1| PREDICTED: F-box protein At4g35930-like [Cucumis sativus]
           gi|449524671|ref|XP_004169345.1| PREDICTED: F-box
           protein At4g35930-like [Cucumis sativus]
          Length = 266

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 51/88 (57%), Positives = 59/88 (67%)
 Frame = +3

Query: 45  SPLMLLSPQRTVPALFGGPLLFSSSKSGTPMTPRTPCLAADRGSDSDSRLESLPMDLLVK 224
           SPLML SP +         L+   +  GTP TPR          +S+SRLESLPMDLLVK
Sbjct: 77  SPLML-SPVK---------LVMHINHIGTPKTPRV------EDCESESRLESLPMDLLVK 120

Query: 225 ILCHLHHDQLRPTFHVSQKIRKAVIIAR 308
           ILCHLHHDQLR  FHVSQ+IRKAV++AR
Sbjct: 121 ILCHLHHDQLRAVFHVSQRIRKAVLLAR 148


>ref|XP_003547917.1| PREDICTED: F-box protein At4g35930-like [Glycine max]
          Length = 284

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 48/70 (68%), Positives = 52/70 (74%)
 Frame = +3

Query: 99  PLLFSSSKSGTPMTPRTPCLAADRGSDSDSRLESLPMDLLVKILCHLHHDQLRPTFHVSQ 278
           P+      SG   TP+TP L     S S+S+LESLPMDLLVKILCHLHHDQLR  FHVSQ
Sbjct: 100 PVNLVKHNSGFVGTPKTPRLD---DSLSESKLESLPMDLLVKILCHLHHDQLRAVFHVSQ 156

Query: 279 KIRKAVIIAR 308
           KIRKAVIIAR
Sbjct: 157 KIRKAVIIAR 166


>ref|XP_002269563.2| PREDICTED: F-box protein At4g35930, partial [Vitis vinifera]
          Length = 189

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 45/68 (66%), Positives = 51/68 (75%)
 Frame = +3

Query: 105 LFSSSKSGTPMTPRTPCLAADRGSDSDSRLESLPMDLLVKILCHLHHDQLRPTFHVSQKI 284
           L  SS  GTP TPR          +S+S+LESLPMDLLVKILCHLHHDQLR  FHVSQ+I
Sbjct: 10  LKQSSLMGTPRTPRVD------ECESESKLESLPMDLLVKILCHLHHDQLRAVFHVSQRI 63

Query: 285 RKAVIIAR 308
           RKAV++AR
Sbjct: 64  RKAVLLAR 71


>emb|CAN71843.1| hypothetical protein VITISV_036263 [Vitis vinifera]
          Length = 463

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 45/68 (66%), Positives = 51/68 (75%)
 Frame = +3

Query: 105 LFSSSKSGTPMTPRTPCLAADRGSDSDSRLESLPMDLLVKILCHLHHDQLRPTFHVSQKI 284
           L  SS  GTP TPR          +S+S+LESLPMDLLVKILCHLHHDQLR  FHVSQ+I
Sbjct: 284 LKQSSLMGTPRTPRVD------ECESESKLESLPMDLLVKILCHLHHDQLRAVFHVSQRI 337

Query: 285 RKAVIIAR 308
           RKAV++AR
Sbjct: 338 RKAVLLAR 345


>ref|XP_002531155.1| conserved hypothetical protein [Ricinus communis]
           gi|223529268|gb|EEF31240.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 55/96 (57%), Positives = 63/96 (65%)
 Frame = +3

Query: 21  DSVISEAHSPLMLLSPQRTVPALFGGPLLFSSSKSGTPMTPRTPCLAADRGSDSDSRLES 200
           +SVI +  SPLML SP           LL  S    TP TPRT         +SDSRLES
Sbjct: 74  NSVIDK--SPLML-SPV---------DLLKHSYLVRTPKTPRT------EDCESDSRLES 115

Query: 201 LPMDLLVKILCHLHHDQLRPTFHVSQKIRKAVIIAR 308
           LPMDLLVKILCHLHHDQLR  FHVS++IR+AV++AR
Sbjct: 116 LPMDLLVKILCHLHHDQLRAVFHVSRRIRRAVVLAR 151