BLASTX nr result

ID: Coptis24_contig00032835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032835
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281500.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...    65   6e-09
emb|CAN80308.1| hypothetical protein VITISV_043559 [Vitis vinifera]    65   6e-09
ref|XP_004163604.1| PREDICTED: LOW QUALITY PROTEIN: glucan endo-...    65   8e-09
ref|XP_004139424.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...    64   1e-08
ref|NP_189076.1| O-Glycosyl hydrolases family 17 protein [Arabid...    62   4e-08

>ref|XP_002281500.1| PREDICTED: glucan endo-1,3-beta-glucosidase 8 [Vitis vinifera]
          Length = 485

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/94 (43%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
 Frame = +2

Query: 2   LIQHVGSGNGTL*EGRRLTCTVLYLSSLMDRSA-TFEPGAFERHWHIFLFNGKPKYELDL 178
           LI HV SG GT     ++     YL SL+D +A +  PG FERHW IF ++GKPKYELD+
Sbjct: 293 LIHHVLSGKGTPARKGKIEA---YLFSLIDENAKSIAPGCFERHWGIFEYDGKPKYELDV 349

Query: 179 SDNQGKK-------V*LVHNMWSNLNQYADDLSD 259
           S ++  K       V  +   W  LN   DDL D
Sbjct: 350 SGSRENKGLVAAEGVKYMVRRWCVLNPNTDDLED 383


>emb|CAN80308.1| hypothetical protein VITISV_043559 [Vitis vinifera]
          Length = 437

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/94 (43%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
 Frame = +2

Query: 2   LIQHVGSGNGTL*EGRRLTCTVLYLSSLMDRSA-TFEPGAFERHWHIFLFNGKPKYELDL 178
           LI HV SG GT     ++     YL SL+D +A +  PG FERHW IF ++GKPKYELD+
Sbjct: 245 LIHHVLSGKGTPARKGKIEA---YLFSLIDENAKSIAPGCFERHWGIFEYDGKPKYELDV 301

Query: 179 SDNQGKK-------V*LVHNMWSNLNQYADDLSD 259
           S ++  K       V  +   W  LN   DDL D
Sbjct: 302 SGSRENKGLVAAEGVKYMVRRWCVLNPNTDDLED 335


>ref|XP_004163604.1| PREDICTED: LOW QUALITY PROTEIN: glucan endo-1,3-beta-glucosidase
           8-like [Cucumis sativus]
          Length = 478

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 8/91 (8%)
 Frame = +2

Query: 2   LIQHVGSGNGTL*EGRRLTCTVLYLSSLMDRSA-TFEPGAFERHWHIFLFNGKPKYELDL 178
           L++H  SG GT     R+    +YL SL+D +A + EPG+FERHW IF F+GKPKYELDL
Sbjct: 275 LLRHALSGQGT---PARVGIIDVYLFSLIDENAKSIEPGSFERHWGIFEFDGKPKYELDL 331

Query: 179 SDNQGKK-------V*LVHNMWSNLNQYADD 250
           +  + +K       V  +   W  LN   +D
Sbjct: 332 AGTEEEKGLIPVEGVRYMGKRWCXLNPNVND 362


>ref|XP_004139424.1| PREDICTED: glucan endo-1,3-beta-glucosidase 8-like [Cucumis
           sativus]
          Length = 449

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/67 (50%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
 Frame = +2

Query: 2   LIQHVGSGNGTL*EGRRLTCTVLYLSSLMDRSA-TFEPGAFERHWHIFLFNGKPKYELDL 178
           L++H  SG GT     R+    +YL SL+D +A + EPG+FERHW IF F+GKPKYELDL
Sbjct: 275 LLRHALSGQGT---PARVGIIDVYLFSLIDENAKSIEPGSFERHWGIFEFDGKPKYELDL 331

Query: 179 SDNQGKK 199
           +  + +K
Sbjct: 332 AGTEEEK 338


>ref|NP_189076.1| O-Glycosyl hydrolases family 17 protein [Arabidopsis thaliana]
           gi|11994695|dbj|BAB02933.1| beta-1,3-glucanase-like
           protein [Arabidopsis thaliana]
           gi|67633662|gb|AAY78755.1| glycosyl hydrolase family 17
           protein [Arabidopsis thaliana]
           gi|332643369|gb|AEE76890.1| O-Glycosyl hydrolases family
           17 protein [Arabidopsis thaliana]
          Length = 500

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = +2

Query: 2   LIQHVGSGNGTL*EGRRLTCTVLYLSSLMDRSA-TFEPGAFERHWHIFLFNGKPKYELDL 178
           +++H  SGNGT    R+     +YL SL+D  A +  PG FERHW IF F+G+PKYELDL
Sbjct: 303 MVKHAMSGNGT--PARKGVIMDVYLFSLVDEDAKSIAPGTFERHWGIFEFDGRPKYELDL 360

Query: 179 SDNQGKK 199
           S     K
Sbjct: 361 SGKGNDK 367