BLASTX nr result

ID: Coptis24_contig00032832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032832
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera]    57   1e-06
ref|XP_003530245.1| PREDICTED: Werner Syndrome-like exonuclease-...    57   2e-06
emb|CBI32833.3| unnamed protein product [Vitis vinifera]               57   2e-06
dbj|BAC16150.1| hypothetical protein [Oryza sativa Japonica Grou...    55   5e-06
ref|NP_001058743.2| Os07g0112400 [Oryza sativa Japonica Group] g...    55   5e-06

>emb|CAN60287.1| hypothetical protein VITISV_011782 [Vitis vinifera]
          Length = 208

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/58 (50%), Positives = 37/58 (63%)
 Frame = +1

Query: 19  ELQRASMESLVGRFFGYHGVGKDPNVARSEWDADWLDDEQVLYASVDAFVSFQMGKEM 192
           EL+ A ++ L     G   V K  +VARS WD DWL D QV YA VDAFVSF++G+ +
Sbjct: 147 ELRNAGIKRLAREVLGRE-VEKPKHVARSRWDTDWLSDAQVHYACVDAFVSFEVGRSL 203


>ref|XP_003530245.1| PREDICTED: Werner Syndrome-like exonuclease-like [Glycine max]
          Length = 238

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 28/64 (43%), Positives = 41/64 (64%)
 Frame = +1

Query: 1   DRFGEYELQRASMESLVGRFFGYHGVGKDPNVARSEWDADWLDDEQVLYASVDAFVSFQM 180
           +R G+ EL+RA ++SL  R  G   V K   V RS WD  WL  +QV YA+VDAF+S+++
Sbjct: 172 ERLGDLELKRAGLKSLGLRVLGLE-VAKPKRVTRSRWDNPWLTAQQVQYAAVDAFLSYEI 230

Query: 181 GKEM 192
            + +
Sbjct: 231 DRRL 234


>emb|CBI32833.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/56 (51%), Positives = 36/56 (64%)
 Frame = +1

Query: 19  ELQRASMESLVGRFFGYHGVGKDPNVARSEWDADWLDDEQVLYASVDAFVSFQMGK 186
           EL+ A ++ L     G   V K  +VARS WD DWL D QV YA VDAFVSF++G+
Sbjct: 147 ELRNAGIKRLAREVLGRE-VEKPKHVARSRWDTDWLSDAQVHYACVDAFVSFEVGR 201


>dbj|BAC16150.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|24414042|dbj|BAC22291.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 752

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = +1

Query: 31  ASMESLVGRFFGYHGVGKDPNVARSEWDADWLDDEQVLYASVDAFVSFQM 180
           ASME++  RF GY G+ K  NV+ S W A +L  EQV YA VDA+++F++
Sbjct: 158 ASMEAMADRFLGYPGIAKPTNVSMSAWHAPYLSIEQVEYACVDAYLAFRL 207


>ref|NP_001058743.2| Os07g0112400 [Oryza sativa Japonica Group]
           gi|255677453|dbj|BAF20657.2| Os07g0112400 [Oryza sativa
           Japonica Group]
          Length = 768

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 25/50 (50%), Positives = 35/50 (70%)
 Frame = +1

Query: 31  ASMESLVGRFFGYHGVGKDPNVARSEWDADWLDDEQVLYASVDAFVSFQM 180
           ASME++  RF GY G+ K  NV+ S W A +L  EQV YA VDA+++F++
Sbjct: 158 ASMEAMADRFLGYPGIAKPTNVSMSAWHAPYLSIEQVEYACVDAYLAFRL 207


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