BLASTX nr result

ID: Coptis24_contig00032806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032806
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78586.1| hypothetical protein VITISV_016766 [Vitis vinifera]   162   2e-38
ref|XP_002533566.1| conserved hypothetical protein [Ricinus comm...   162   3e-38
ref|XP_003601915.1| Glucan 1,3-beta-glucosidase [Medicago trunca...   159   3e-37
ref|XP_002310872.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_002262875.2| PREDICTED: probable glucan 1,3-beta-glucosid...   144   7e-33

>emb|CAN78586.1| hypothetical protein VITISV_016766 [Vitis vinifera]
          Length = 274

 Score =  162 bits (411), Expect = 2e-38
 Identities = 77/109 (70%), Positives = 92/109 (84%)
 Frame = +1

Query: 1   GGGLNVSVDREAPSSWETFRLWRVSEAEFQFRTSGGQFLSCDGQGSSVSAMAESPSTTET 180
           GGG+ V+VD++ PSSWETFRLWRVS++EFQFRTS GQFL CDG+G SVSAMA S S  ET
Sbjct: 83  GGGMGVTVDKDVPSSWETFRLWRVSDSEFQFRTSQGQFLXCDGEGGSVSAMAGSSSIKET 142

Query: 181 FYVERNNINSRVHIRLLSGSYVQASSSYQLRADYPGKPGWDDNMATFEM 327
           FYVER N ++RVHI+L +G+Y+QA+ + QL ADYPG PGWDDN ATFEM
Sbjct: 143 FYVER-NYDNRVHIKLKNGNYLQATLANQLSADYPGMPGWDDNAATFEM 190


>ref|XP_002533566.1| conserved hypothetical protein [Ricinus communis]
           gi|223526566|gb|EEF28823.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 515

 Score =  162 bits (409), Expect = 3e-38
 Identities = 77/109 (70%), Positives = 90/109 (82%)
 Frame = +1

Query: 1   GGGLNVSVDREAPSSWETFRLWRVSEAEFQFRTSGGQFLSCDGQGSSVSAMAESPSTTET 180
           GGG+ V+VDR+A SSWETFRLWR SE EFQ  TS GQFL+CDG+G S+SA A S S   T
Sbjct: 67  GGGMGVTVDRDAASSWETFRLWRHSELEFQLHTSQGQFLTCDGEGCSISATANSSSAGTT 126

Query: 181 FYVERNNINSRVHIRLLSGSYVQASSSYQLRADYPGKPGWDDNMATFEM 327
           F++ERNN N+RVHI+L SG+Y+QAS+  QLRADYPGKPGWDDN ATFEM
Sbjct: 127 FFIERNN-NNRVHIKLNSGTYLQASTGNQLRADYPGKPGWDDNAATFEM 174


>ref|XP_003601915.1| Glucan 1,3-beta-glucosidase [Medicago truncatula]
           gi|355490963|gb|AES72166.1| Glucan 1,3-beta-glucosidase
           [Medicago truncatula]
          Length = 533

 Score =  159 bits (401), Expect = 3e-37
 Identities = 75/109 (68%), Positives = 91/109 (83%)
 Frame = +1

Query: 1   GGGLNVSVDREAPSSWETFRLWRVSEAEFQFRTSGGQFLSCDGQGSSVSAMAESPSTTET 180
           GGG+NV+VDR+APSSWETFRLWRVSE+EFQFRT+ G FL+CDG G +VSA A+SPST+E 
Sbjct: 85  GGGMNVTVDRDAPSSWETFRLWRVSESEFQFRTNQGPFLTCDGGGCTVSATAKSPSTSEI 144

Query: 181 FYVERNNINSRVHIRLLSGSYVQASSSYQLRADYPGKPGWDDNMATFEM 327
           F V+RN  N +VHI++  G Y+QA++  QL ADYPG PGWDDN ATFEM
Sbjct: 145 FEVKRNEKN-KVHIKIKDGPYLQATTGNQLTADYPGVPGWDDNSATFEM 192


>ref|XP_002310872.1| predicted protein [Populus trichocarpa] gi|222853775|gb|EEE91322.1|
           predicted protein [Populus trichocarpa]
          Length = 494

 Score =  145 bits (367), Expect = 3e-33
 Identities = 68/110 (61%), Positives = 86/110 (78%)
 Frame = +1

Query: 1   GGGLNVSVDREAPSSWETFRLWRVSEAEFQFRTSGGQFLSCDGQGSSVSAMAESPSTTET 180
           GGG+ V+V R+   SWETF+LWRVS +EFQ RTS G FL+C G+G S+SA A SPS  E 
Sbjct: 51  GGGMGVTVYRDVAFSWETFKLWRVSASEFQLRTSQGYFLACYGEGCSISATANSPSEGEI 110

Query: 181 FYVERNNINSRVHIRLLSGSYVQASSSYQLRADYPGKPGWDDNMATFEMI 330
           FY+ERNN N++VHI+L++G+Y+Q +    L ADYPGKPGWDDN ATFEM+
Sbjct: 111 FYIERNN-NNQVHIKLITGAYLQVTVGNLLTADYPGKPGWDDNAATFEMM 159


>ref|XP_002262875.2| PREDICTED: probable glucan 1,3-beta-glucosidase A-like [Vitis
           vinifera]
          Length = 539

 Score =  144 bits (363), Expect = 7e-33
 Identities = 69/95 (72%), Positives = 81/95 (85%)
 Frame = +1

Query: 43  SWETFRLWRVSEAEFQFRTSGGQFLSCDGQGSSVSAMAESPSTTETFYVERNNINSRVHI 222
           SWETFRLWRVS++EFQFRTS GQFL+CDG+G SVSAMA S S  ETFYVER N ++RVHI
Sbjct: 105 SWETFRLWRVSDSEFQFRTSQGQFLACDGEGGSVSAMAGSSSIKETFYVER-NYDNRVHI 163

Query: 223 RLLSGSYVQASSSYQLRADYPGKPGWDDNMATFEM 327
           +L +G+Y+QA+ + QL ADYPG PGWDDN ATFEM
Sbjct: 164 KLKNGNYLQATLANQLSADYPGMPGWDDNAATFEM 198


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