BLASTX nr result

ID: Coptis24_contig00032785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032785
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632814.1| PREDICTED: uncharacterized protein LOC100854...    67   1e-09
ref|XP_002533815.1| conserved hypothetical protein [Ricinus comm...    61   8e-08
ref|XP_002326434.1| predicted protein [Populus trichocarpa] gi|1...    61   8e-08
ref|XP_002303335.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_003632814.1| PREDICTED: uncharacterized protein LOC100854504 [Vitis vinifera]
           gi|297742923|emb|CBI35790.3| unnamed protein product
           [Vitis vinifera]
          Length = 162

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 35/61 (57%), Positives = 42/61 (68%)
 Frame = -1

Query: 415 PIYGSERKAGPTSQARRHTSGPITSFFTPARGEGISLPYVSLDQLNHPIVSQAYGPVYLV 236
           PIYGS R+    S+ RR TSGP+TS F P R     +PYVSL+QL+    +QAYGPVYLV
Sbjct: 104 PIYGSGRRTD--SKQRRPTSGPLTSLFNPTRKAETDIPYVSLNQLSSSHSAQAYGPVYLV 161

Query: 235 T 233
           T
Sbjct: 162 T 162


>ref|XP_002533815.1| conserved hypothetical protein [Ricinus communis]
           gi|223526252|gb|EEF28568.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 165

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/61 (52%), Positives = 41/61 (67%)
 Frame = -1

Query: 415 PIYGSERKAGPTSQARRHTSGPITSFFTPARGEGISLPYVSLDQLNHPIVSQAYGPVYLV 236
           PIYGS   A   S+ RR TSGP+T+ F   +  G  +PY+ LDQL+ P  ++AYGPVYLV
Sbjct: 106 PIYGSGGLA-VESKHRRQTSGPLTNLFNSTKRTGNEIPYMCLDQLSSPHGAKAYGPVYLV 164

Query: 235 T 233
           T
Sbjct: 165 T 165


>ref|XP_002326434.1| predicted protein [Populus trichocarpa] gi|118483226|gb|ABK93516.1|
           unknown [Populus trichocarpa]
           gi|222833756|gb|EEE72233.1| predicted protein [Populus
           trichocarpa]
          Length = 161

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/61 (52%), Positives = 41/61 (67%)
 Frame = -1

Query: 415 PIYGSERKAGPTSQARRHTSGPITSFFTPARGEGISLPYVSLDQLNHPIVSQAYGPVYLV 236
           PIYGS R  G  ++ RR TSGP+T+ F  ++      PY+ LDQLN+P   +AYGPVYLV
Sbjct: 103 PIYGSAR--GVDARHRRQTSGPLTNLFNHSKRVENETPYMCLDQLNNPHGVKAYGPVYLV 160

Query: 235 T 233
           T
Sbjct: 161 T 161


>ref|XP_002303335.1| predicted protein [Populus trichocarpa] gi|222840767|gb|EEE78314.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/61 (52%), Positives = 39/61 (63%)
 Frame = -1

Query: 415 PIYGSERKAGPTSQARRHTSGPITSFFTPARGEGISLPYVSLDQLNHPIVSQAYGPVYLV 236
           PIYGS R  G   + RR TSGP+T+ F  ++       YV LDQLN+P   +AYGPVYLV
Sbjct: 103 PIYGSGR--GVEIRYRRQTSGPLTNLFNRSKSVENENRYVCLDQLNNPQGVKAYGPVYLV 160

Query: 235 T 233
           T
Sbjct: 161 T 161


Top