BLASTX nr result
ID: Coptis24_contig00032776
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032776 (389 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|2... 188 3e-46 ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [... 183 1e-44 emb|CBI23232.3| unnamed protein product [Vitis vinifera] 183 1e-44 gb|ADN34060.1| endonuclease/exonuclease/phosphatase family prote... 177 6e-43 ref|XP_004158004.1| PREDICTED: LOW QUALITY PROTEIN: tyrosyl-DNA ... 177 8e-43 >ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|222832812|gb|EEE71289.1| predicted protein [Populus trichocarpa] Length = 422 Score = 188 bits (478), Expect = 3e-46 Identities = 89/129 (68%), Positives = 100/129 (77%) Frame = -1 Query: 389 ERVDQAKEAFTFLNNSTNVVFCGDMNWDDKLDGNVPFPDGWVDAWAKLRPREDGFTYDTK 210 ERVDQAKEA L ++NV+FCGDMNWDDKLDG PFPDGWVDAW +L+P ++G+TYDTK Sbjct: 288 ERVDQAKEAINLLKKNSNVIFCGDMNWDDKLDGQFPFPDGWVDAWVELKPGDNGWTYDTK 347 Query: 209 SNQMLSANRKLQKRLDRFLCSFRDYKISGIDMIGTEAIPGLSYCXXXXXXXXXXXLMLPV 30 SNQMLS NR LQKRLDRF+CS D+KIS IDMIG +AIPGLSY L LPV Sbjct: 348 SNQMLSGNRALQKRLDRFICSLCDFKISKIDMIGKDAIPGLSYMKEKKVRKEVKMLELPV 407 Query: 29 YPSDHYGLL 3 PSDHYGLL Sbjct: 408 LPSDHYGLL 416 >ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Vitis vinifera] Length = 447 Score = 183 bits (465), Expect = 1e-44 Identities = 88/129 (68%), Positives = 96/129 (74%) Frame = -1 Query: 389 ERVDQAKEAFTFLNNSTNVVFCGDMNWDDKLDGNVPFPDGWVDAWAKLRPREDGFTYDTK 210 ERVDQAKEA L + NV+F GDMNWD+K DG P PDGWVDAWA LRP E+G+TYDTK Sbjct: 313 ERVDQAKEALNLLTKNPNVIFGGDMNWDEKSDGQFPLPDGWVDAWADLRPGENGWTYDTK 372 Query: 209 SNQMLSANRKLQKRLDRFLCSFRDYKISGIDMIGTEAIPGLSYCXXXXXXXXXXXLMLPV 30 SNQMLS NR LQKRLDRF+C D+KIS IDMIG E IPGLSYC L+LPV Sbjct: 373 SNQMLSGNRTLQKRLDRFMCRLHDFKISKIDMIGMEPIPGLSYCKEKKVRKEMQQLVLPV 432 Query: 29 YPSDHYGLL 3 PSDHYGLL Sbjct: 433 LPSDHYGLL 441 >emb|CBI23232.3| unnamed protein product [Vitis vinifera] Length = 961 Score = 183 bits (465), Expect = 1e-44 Identities = 88/129 (68%), Positives = 96/129 (74%) Frame = -1 Query: 389 ERVDQAKEAFTFLNNSTNVVFCGDMNWDDKLDGNVPFPDGWVDAWAKLRPREDGFTYDTK 210 ERVDQAKEA L + NV+F GDMNWD+K DG P PDGWVDAWA LRP E+G+TYDTK Sbjct: 827 ERVDQAKEALNLLTKNPNVIFGGDMNWDEKSDGQFPLPDGWVDAWADLRPGENGWTYDTK 886 Query: 209 SNQMLSANRKLQKRLDRFLCSFRDYKISGIDMIGTEAIPGLSYCXXXXXXXXXXXLMLPV 30 SNQMLS NR LQKRLDRF+C D+KIS IDMIG E IPGLSYC L+LPV Sbjct: 887 SNQMLSGNRTLQKRLDRFMCRLHDFKISKIDMIGMEPIPGLSYCKEKKVRKEMQQLVLPV 946 Query: 29 YPSDHYGLL 3 PSDHYGLL Sbjct: 947 LPSDHYGLL 955 >gb|ADN34060.1| endonuclease/exonuclease/phosphatase family protein [Cucumis melo subsp. melo] Length = 481 Score = 177 bits (450), Expect = 6e-43 Identities = 82/129 (63%), Positives = 99/129 (76%) Frame = -1 Query: 389 ERVDQAKEAFTFLNNSTNVVFCGDMNWDDKLDGNVPFPDGWVDAWAKLRPREDGFTYDTK 210 ERV QAK+A FL + NV+F GDMNWDDKLDG PFPDGW+DAW +LRP E+G+TYDTK Sbjct: 347 ERVVQAKQAVDFLKETPNVIFGGDMNWDDKLDGQFPFPDGWIDAWEELRPGENGWTYDTK 406 Query: 209 SNQMLSANRKLQKRLDRFLCSFRDYKISGIDMIGTEAIPGLSYCXXXXXXXXXXXLMLPV 30 SN+MLS NR LQKRLDRF+C +D+K++ I+MIGT++IPGL+Y L LPV Sbjct: 407 SNKMLSGNRTLQKRLDRFICKLQDFKVNSIEMIGTDSIPGLTYTKEKKVGKEMKTLELPV 466 Query: 29 YPSDHYGLL 3 PSDHYGLL Sbjct: 467 LPSDHYGLL 475 >ref|XP_004158004.1| PREDICTED: LOW QUALITY PROTEIN: tyrosyl-DNA phosphodiesterase 2-like [Cucumis sativus] Length = 463 Score = 177 bits (449), Expect = 8e-43 Identities = 82/129 (63%), Positives = 99/129 (76%) Frame = -1 Query: 389 ERVDQAKEAFTFLNNSTNVVFCGDMNWDDKLDGNVPFPDGWVDAWAKLRPREDGFTYDTK 210 ERV QAK++ FL + NV+F GDMNWDDKLDG PFPDGW+DAW +LRP E+G+TYDTK Sbjct: 329 ERVVQAKQSVGFLKETPNVIFGGDMNWDDKLDGRFPFPDGWIDAWEELRPGENGWTYDTK 388 Query: 209 SNQMLSANRKLQKRLDRFLCSFRDYKISGIDMIGTEAIPGLSYCXXXXXXXXXXXLMLPV 30 SN+MLS NR LQKRLDRF+C +D+K++ I+MIGT++IPGLSY L LPV Sbjct: 389 SNKMLSGNRTLQKRLDRFICKLQDFKVNSIEMIGTDSIPGLSYTKEKKVGKDRKTLELPV 448 Query: 29 YPSDHYGLL 3 PSDHYGLL Sbjct: 449 LPSDHYGLL 457