BLASTX nr result

ID: Coptis24_contig00032776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032776
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|2...   188   3e-46
ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [...   183   1e-44
emb|CBI23232.3| unnamed protein product [Vitis vinifera]              183   1e-44
gb|ADN34060.1| endonuclease/exonuclease/phosphatase family prote...   177   6e-43
ref|XP_004158004.1| PREDICTED: LOW QUALITY PROTEIN: tyrosyl-DNA ...   177   8e-43

>ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|222832812|gb|EEE71289.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  188 bits (478), Expect = 3e-46
 Identities = 89/129 (68%), Positives = 100/129 (77%)
 Frame = -1

Query: 389 ERVDQAKEAFTFLNNSTNVVFCGDMNWDDKLDGNVPFPDGWVDAWAKLRPREDGFTYDTK 210
           ERVDQAKEA   L  ++NV+FCGDMNWDDKLDG  PFPDGWVDAW +L+P ++G+TYDTK
Sbjct: 288 ERVDQAKEAINLLKKNSNVIFCGDMNWDDKLDGQFPFPDGWVDAWVELKPGDNGWTYDTK 347

Query: 209 SNQMLSANRKLQKRLDRFLCSFRDYKISGIDMIGTEAIPGLSYCXXXXXXXXXXXLMLPV 30
           SNQMLS NR LQKRLDRF+CS  D+KIS IDMIG +AIPGLSY            L LPV
Sbjct: 348 SNQMLSGNRALQKRLDRFICSLCDFKISKIDMIGKDAIPGLSYMKEKKVRKEVKMLELPV 407

Query: 29  YPSDHYGLL 3
            PSDHYGLL
Sbjct: 408 LPSDHYGLL 416


>ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Vitis vinifera]
          Length = 447

 Score =  183 bits (465), Expect = 1e-44
 Identities = 88/129 (68%), Positives = 96/129 (74%)
 Frame = -1

Query: 389 ERVDQAKEAFTFLNNSTNVVFCGDMNWDDKLDGNVPFPDGWVDAWAKLRPREDGFTYDTK 210
           ERVDQAKEA   L  + NV+F GDMNWD+K DG  P PDGWVDAWA LRP E+G+TYDTK
Sbjct: 313 ERVDQAKEALNLLTKNPNVIFGGDMNWDEKSDGQFPLPDGWVDAWADLRPGENGWTYDTK 372

Query: 209 SNQMLSANRKLQKRLDRFLCSFRDYKISGIDMIGTEAIPGLSYCXXXXXXXXXXXLMLPV 30
           SNQMLS NR LQKRLDRF+C   D+KIS IDMIG E IPGLSYC           L+LPV
Sbjct: 373 SNQMLSGNRTLQKRLDRFMCRLHDFKISKIDMIGMEPIPGLSYCKEKKVRKEMQQLVLPV 432

Query: 29  YPSDHYGLL 3
            PSDHYGLL
Sbjct: 433 LPSDHYGLL 441


>emb|CBI23232.3| unnamed protein product [Vitis vinifera]
          Length = 961

 Score =  183 bits (465), Expect = 1e-44
 Identities = 88/129 (68%), Positives = 96/129 (74%)
 Frame = -1

Query: 389  ERVDQAKEAFTFLNNSTNVVFCGDMNWDDKLDGNVPFPDGWVDAWAKLRPREDGFTYDTK 210
            ERVDQAKEA   L  + NV+F GDMNWD+K DG  P PDGWVDAWA LRP E+G+TYDTK
Sbjct: 827  ERVDQAKEALNLLTKNPNVIFGGDMNWDEKSDGQFPLPDGWVDAWADLRPGENGWTYDTK 886

Query: 209  SNQMLSANRKLQKRLDRFLCSFRDYKISGIDMIGTEAIPGLSYCXXXXXXXXXXXLMLPV 30
            SNQMLS NR LQKRLDRF+C   D+KIS IDMIG E IPGLSYC           L+LPV
Sbjct: 887  SNQMLSGNRTLQKRLDRFMCRLHDFKISKIDMIGMEPIPGLSYCKEKKVRKEMQQLVLPV 946

Query: 29   YPSDHYGLL 3
             PSDHYGLL
Sbjct: 947  LPSDHYGLL 955


>gb|ADN34060.1| endonuclease/exonuclease/phosphatase family protein [Cucumis melo
           subsp. melo]
          Length = 481

 Score =  177 bits (450), Expect = 6e-43
 Identities = 82/129 (63%), Positives = 99/129 (76%)
 Frame = -1

Query: 389 ERVDQAKEAFTFLNNSTNVVFCGDMNWDDKLDGNVPFPDGWVDAWAKLRPREDGFTYDTK 210
           ERV QAK+A  FL  + NV+F GDMNWDDKLDG  PFPDGW+DAW +LRP E+G+TYDTK
Sbjct: 347 ERVVQAKQAVDFLKETPNVIFGGDMNWDDKLDGQFPFPDGWIDAWEELRPGENGWTYDTK 406

Query: 209 SNQMLSANRKLQKRLDRFLCSFRDYKISGIDMIGTEAIPGLSYCXXXXXXXXXXXLMLPV 30
           SN+MLS NR LQKRLDRF+C  +D+K++ I+MIGT++IPGL+Y            L LPV
Sbjct: 407 SNKMLSGNRTLQKRLDRFICKLQDFKVNSIEMIGTDSIPGLTYTKEKKVGKEMKTLELPV 466

Query: 29  YPSDHYGLL 3
            PSDHYGLL
Sbjct: 467 LPSDHYGLL 475


>ref|XP_004158004.1| PREDICTED: LOW QUALITY PROTEIN: tyrosyl-DNA phosphodiesterase
           2-like [Cucumis sativus]
          Length = 463

 Score =  177 bits (449), Expect = 8e-43
 Identities = 82/129 (63%), Positives = 99/129 (76%)
 Frame = -1

Query: 389 ERVDQAKEAFTFLNNSTNVVFCGDMNWDDKLDGNVPFPDGWVDAWAKLRPREDGFTYDTK 210
           ERV QAK++  FL  + NV+F GDMNWDDKLDG  PFPDGW+DAW +LRP E+G+TYDTK
Sbjct: 329 ERVVQAKQSVGFLKETPNVIFGGDMNWDDKLDGRFPFPDGWIDAWEELRPGENGWTYDTK 388

Query: 209 SNQMLSANRKLQKRLDRFLCSFRDYKISGIDMIGTEAIPGLSYCXXXXXXXXXXXLMLPV 30
           SN+MLS NR LQKRLDRF+C  +D+K++ I+MIGT++IPGLSY            L LPV
Sbjct: 389 SNKMLSGNRTLQKRLDRFICKLQDFKVNSIEMIGTDSIPGLSYTKEKKVGKDRKTLELPV 448

Query: 29  YPSDHYGLL 3
            PSDHYGLL
Sbjct: 449 LPSDHYGLL 457


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