BLASTX nr result

ID: Coptis24_contig00032760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032760
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71419.1| hypothetical protein VITISV_018564 [Vitis vinifera]    43   5e-08
emb|CAN60396.1| hypothetical protein VITISV_018063 [Vitis vinifera]    45   6e-08
emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera]    45   7e-08
emb|CAN78192.1| hypothetical protein VITISV_036909 [Vitis vinifera]    46   1e-07
emb|CAN73703.1| hypothetical protein VITISV_000540 [Vitis vinifera]    48   1e-07

>emb|CAN71419.1| hypothetical protein VITISV_018564 [Vitis vinifera]
          Length = 266

 Score = 42.7 bits (99), Expect(2) = 5e-08
 Identities = 21/33 (63%), Positives = 25/33 (75%)
 Frame = +1

Query: 64  IKDLGPAKQILGMHISRDRPNRTLQLSQAESLK 162
           +KDLG  KQILGM I RD+ N TL+LSQ E +K
Sbjct: 1   MKDLGATKQILGMRIIRDKANGTLKLSQLEYVK 33



 Score = 39.3 bits (90), Expect(2) = 5e-08
 Identities = 21/45 (46%), Positives = 27/45 (60%)
 Frame = +3

Query: 153 VAKVLKRFNMEGAKPVSTPLRKK*FHTFSKWSQCTREKQEQDANI 287
           V KVL RFNM  AKPVSTPL    F    +WS  T E+++  + +
Sbjct: 32  VKKVLSRFNMNEAKPVSTPLGSP-FKLSKEWSPKTEEERDHMSKV 75


>emb|CAN60396.1| hypothetical protein VITISV_018063 [Vitis vinifera]
          Length = 1294

 Score = 45.4 bits (106), Expect(2) = 6e-08
 Identities = 23/36 (63%), Positives = 28/36 (77%)
 Frame = +1

Query: 55   QELIKDLGPAKQILGMHISRDRPNRTLQLSQAESLK 162
            Q  +KDLG AKQILGM I RD+ N TL+LSQ+E +K
Sbjct: 937  QFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVK 972



 Score = 36.2 bits (82), Expect(2) = 6e-08
 Identities = 21/45 (46%), Positives = 27/45 (60%)
 Frame = +3

Query: 153  VAKVLKRFNMEGAKPVSTPLRKK*FHTFSKWSQCTREKQEQDANI 287
            V KVL RFNM  AKPVSTPL    F    + S  T E+++Q + +
Sbjct: 971  VKKVLSRFNMNEAKPVSTPLGSH-FKLSKEQSPKTEEERDQMSKV 1014


>emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera]
          Length = 1286

 Score = 45.4 bits (106), Expect(2) = 7e-08
 Identities = 23/36 (63%), Positives = 28/36 (77%)
 Frame = +1

Query: 55   QELIKDLGPAKQILGMHISRDRPNRTLQLSQAESLK 162
            Q  +KDLG AKQILGM I RD+ N TL+LSQ+E +K
Sbjct: 991  QFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVK 1026



 Score = 35.8 bits (81), Expect(2) = 7e-08
 Identities = 21/45 (46%), Positives = 26/45 (57%)
 Frame = +3

Query: 153  VAKVLKRFNMEGAKPVSTPLRKK*FHTFSKWSQCTREKQEQDANI 287
            V KVL RFNM  AKPVSTPL    F    + S  T EK++  + +
Sbjct: 1025 VKKVLSRFNMNEAKPVSTPLGSH-FKLSKEQSPKTEEKRDHMSKV 1068


>emb|CAN78192.1| hypothetical protein VITISV_036909 [Vitis vinifera]
          Length = 1032

 Score = 46.2 bits (108), Expect(2) = 1e-07
 Identities = 23/36 (63%), Positives = 29/36 (80%)
 Frame = +1

Query: 55  QELIKDLGPAKQILGMHISRDRPNRTLQLSQAESLK 162
           Q ++KDLG AKQILGM I RD+ N TL+LSQ+E +K
Sbjct: 752 QFVMKDLGAAKQILGMRIVRDKANGTLKLSQSEYVK 787



 Score = 34.7 bits (78), Expect(2) = 1e-07
 Identities = 20/42 (47%), Positives = 25/42 (59%)
 Frame = +3

Query: 153 VAKVLKRFNMEGAKPVSTPLRKK*FHTFSKWSQCTREKQEQD 278
           V KVL RFNM  AKPVSTPL     H      Q ++ ++E+D
Sbjct: 786 VKKVLSRFNMNEAKPVSTPLGS---HFKLSKEQSSKTEKERD 824


>emb|CAN73703.1| hypothetical protein VITISV_000540 [Vitis vinifera]
          Length = 612

 Score = 48.1 bits (113), Expect(2) = 1e-07
 Identities = 24/36 (66%), Positives = 29/36 (80%)
 Frame = +1

Query: 55  QELIKDLGPAKQILGMHISRDRPNRTLQLSQAESLK 162
           Q  +KDLG AKQILGM I RD+ N TL+LSQ+ES+K
Sbjct: 317 QFAMKDLGAAKQILGMRIIRDKANGTLKLSQSESMK 352



 Score = 32.7 bits (73), Expect(2) = 1e-07
 Identities = 15/18 (83%), Positives = 15/18 (83%)
 Frame = +3

Query: 159 KVLKRFNMEGAKPVSTPL 212
           KVL RFNM  AKPVSTPL
Sbjct: 353 KVLSRFNMNEAKPVSTPL 370


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