BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032753
         (213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003600535.1| hypothetical protein LCRIS_00063 [Lactobacil...    90   2e-16
emb|CAJ30045.1| conserved hypothetical protein [Magnetospirillum...    84   1e-14
ref|ZP_02043162.1| hypothetical protein RUMGNA_03973 [Ruminococc...    84   1e-14
ref|ZP_04582125.1| LOW QUALITY PROTEIN: conserved hypothetical p...    84   2e-14
ref|ZP_01963575.1| hypothetical protein RUMOBE_01293 [Ruminococc...    83   3e-14

>ref|YP_003600535.1| hypothetical protein LCRIS_00063 [Lactobacillus crispatus ST1]
           gi|295692304|ref|YP_003600914.1| hypothetical protein
           LCRIS_00442 [Lactobacillus crispatus ST1]
           gi|295692317|ref|YP_003600927.1| hypothetical protein
           LCRIS_00455 [Lactobacillus crispatus ST1]
           gi|295693512|ref|YP_003602122.1| hypothetical protein
           LCRIS_01650 [Lactobacillus crispatus ST1]
           gi|295030031|emb|CBL49510.1| conserved protein
           [Lactobacillus crispatus ST1]
           gi|295030410|emb|CBL49889.1| conserved protein
           [Lactobacillus crispatus ST1]
           gi|295030423|emb|CBL49902.1| conserved protein
           [Lactobacillus crispatus ST1]
           gi|295031618|emb|CBL51097.1| conserved protein
           [Lactobacillus crispatus ST1]
          Length = 156

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 44/70 (62%), Positives = 48/70 (68%)
 Frame = -2

Query: 212 EALPK*LSRRTSYLRVCLAFHSDPQLIPIYCNRCGFGPPVRVTAPSTWPWIDHSVSGLLP 33
           EA PK +S RTSYL+V L FH  PQLIP   N  GFGPPVR T PS W W+ H VSGL  
Sbjct: 52  EASPKAISERTSYLQVRLEFHRYPQLIPAIFNLRGFGPPVRFTTPSAWSWVGHLVSGLRH 111

Query: 32  ATMRPIQTRF 3
            T RPI+TRF
Sbjct: 112 LTFRPIKTRF 121


>emb|CAJ30045.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 259

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/53 (73%), Positives = 43/53 (81%)
 Frame = -2

Query: 161 LAFHSDPQLIPIYCNRCGFGPPVRVTAPSTWPWIDHSVSGLLPATMRPIQTRF 3
           +AFH  PQ+IP + NR GFGPPV VT PST PWIDHSVSGL+ AT RPIQTRF
Sbjct: 1   MAFHPYPQIIPDFFNRRGFGPPVGVTPPSTCPWIDHSVSGLMHATRRPIQTRF 53


>ref|ZP_02043162.1| hypothetical protein RUMGNA_03973 [Ruminococcus gnavus ATCC 29149]
           gi|153793277|gb|EDN75700.1| hypothetical protein
           RUMGNA_03973 [Ruminococcus gnavus ATCC 29149]
          Length = 81

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 42/65 (64%), Positives = 45/65 (69%)
 Frame = -2

Query: 212 EALPK*LSRRTSYLRVCLAFHSDPQLIPIYCNRCGFGPPVRVTAPSTWPWIDHSVSGLLP 33
           EA PK +SRRTSYLRV L F   P LIP   N CGFGPP+  TA STW WIDH VSGLL 
Sbjct: 3   EASPKAISRRTSYLRVRLEFLPYPHLIPTLFNGCGFGPPLPFTATSTWTWIDHPVSGLLR 62

Query: 32  ATMRP 18
            T+ P
Sbjct: 63  LTISP 67


>ref|ZP_04582125.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Helicobacter
           bilis ATCC 43879] gi|229373011|gb|EEO23402.1| LOW
           QUALITY PROTEIN: conserved hypothetical protein
           [Helicobacter bilis ATCC 43879]
          Length = 96

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/70 (57%), Positives = 46/70 (65%)
 Frame = -2

Query: 212 EALPK*LSRRTSYLRVCLAFHSDPQLIPIYCNRCGFGPPVRVTAPSTWPWIDHSVSGLLP 33
           EA+PK +S+RTSY +VCLAFH  PQLIP   N   F PP  +T  STWPWIDH  SGL  
Sbjct: 1   EAIPKYISKRTSYHQVCLAFHPYPQLIPTRFNGYEFSPPRAITLASTWPWIDHLASGLQH 60

Query: 32  ATMRPIQTRF 3
            T RP +  F
Sbjct: 61  LTKRPFRLAF 70


>ref|ZP_01963575.1| hypothetical protein RUMOBE_01293 [Ruminococcus obeum ATCC 29174]
           gi|149832795|gb|EDM87878.1| hypothetical protein
           RUMOBE_01293 [Ruminococcus obeum ATCC 29174]
          Length = 199

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/70 (58%), Positives = 48/70 (68%)
 Frame = -2

Query: 212 EALPK*LSRRTSYLRVCLAFHSDPQLIPIYCNRCGFGPPVRVTAPSTWPWIDHSVSGLLP 33
           +A PK +SRRTSYLRV L F   P LIP   N CGFGPP+ +TA STW WIDH VSGL P
Sbjct: 17  KASPKAISRRTSYLRVRLEFLPYPHLIPTLFNGCGFGPPLPLTAASTWTWIDHPVSGLPP 76

Query: 32  ATMRPIQTRF 3
            T+  ++  F
Sbjct: 77  LTLALLRLGF 86