BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032752
         (237 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_05988151.1| hypothetical protein COK_0004 [Mannheimia hae...    56   3e-06
ref|ZP_16380655.1| unnamed protein product [Neisseria lactamica ...    43   4e-06

>ref|ZP_05988151.1| hypothetical protein COK_0004 [Mannheimia haemolytica serotype A2
           str. BOVINE] gi|261494299|ref|ZP_05990795.1|
           hypothetical protein COI_0097 [Mannheimia haemolytica
           serotype A2 str. OVINE] gi|261310041|gb|EEY11248.1|
           hypothetical protein COI_0097 [Mannheimia haemolytica
           serotype A2 str. OVINE] gi|261312773|gb|EEY13892.1|
           hypothetical protein COK_0004 [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 47

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/46 (63%), Positives = 32/46 (69%)
 Frame = +2

Query: 95  DVSTRRVSPV*HVLVFGVCHGLVSLNDPLAITVLYPQECSHEALPK 232
           DVST RVSP  H  VF VC GLV  + PLA TVLYP+ C  +ALPK
Sbjct: 2   DVSTHRVSPEYHSSVFAVCIGLVIRDGPLAETVLYPRRCPLKALPK 47


>ref|ZP_16380655.1| unnamed protein product [Neisseria lactamica Y92-1009]
           gi|309378569|emb|CBX22841.1| unnamed protein product
           [Neisseria lactamica Y92-1009]
          Length = 49

 Score = 43.1 bits (100), Expect(2) = 4e-06
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = -3

Query: 121 GRHTAGANVRREKGNNPDRQLRSQ 50
           GR TAGANVR ++GNNPDR+LRSQ
Sbjct: 23  GRQTAGANVRCQEGNNPDRRLRSQ 46



 Score = 32.3 bits (72), Expect(2) = 4e-06
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = -1

Query: 186 MARGSLRLTKPWQTPNTRTCYTG 118
           MARG L+LT PWQT NT   + G
Sbjct: 1   MARGLLQLTNPWQTQNTIKWFLG 23