BLASTX nr result

ID: Coptis24_contig00032734 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032734
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32
ref|XP_003611892.1| LRR receptor-like serine/threonine-protein k...   141   6e-32
ref|XP_002306327.1| predicted protein [Populus trichocarpa] gi|2...   138   4e-31
ref|XP_002512884.1| serine-threonine protein kinase, plant-type,...   138   5e-31
ref|XP_002316397.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30

>ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|222850885|gb|EEE88432.1|
           predicted protein [Populus trichocarpa]
          Length = 1032

 Score =  143 bits (361), Expect = 1e-32
 Identities = 66/102 (64%), Positives = 78/102 (76%)
 Frame = +1

Query: 4   DPYNITASWNDSNHFCEWEGVTCSYRHQRVRELNLTLKNLLGSISPHIGNLSFLRTLRLS 183
           DP    +SWNDS+HFCEW GVTC  RHQRV EL+L    L+GS+SPHIGNLSFLR L L+
Sbjct: 48  DPLGTLSSWNDSSHFCEWSGVTCGRRHQRVVELDLNSCKLVGSLSPHIGNLSFLRILNLN 107

Query: 184 HNGFQGEIPQELGHLFRLENLILGNNSLVGKFPVNISRCSNL 309
           +N F   IPQE+G LFRL+ L+L NN+  G+ PVNISRCSNL
Sbjct: 108 NNSFSHTIPQEIGRLFRLQKLLLRNNTFTGEIPVNISRCSNL 149


>ref|XP_003611892.1| LRR receptor-like serine/threonine-protein kinase FEI [Medicago
           truncatula] gi|355513227|gb|AES94850.1| LRR
           receptor-like serine/threonine-protein kinase FEI
           [Medicago truncatula]
          Length = 1018

 Score =  141 bits (355), Expect = 6e-32
 Identities = 65/102 (63%), Positives = 77/102 (75%)
 Frame = +1

Query: 4   DPYNITASWNDSNHFCEWEGVTCSYRHQRVRELNLTLKNLLGSISPHIGNLSFLRTLRLS 183
           DPY I ASWN S HFC+W G+TCS  HQRV ELNL    L G ISPH+GNLSFLR L L+
Sbjct: 45  DPYGILASWNSSTHFCKWYGITCSPMHQRVAELNLEGYQLHGLISPHVGNLSFLRNLNLA 104

Query: 184 HNGFQGEIPQELGHLFRLENLILGNNSLVGKFPVNISRCSNL 309
           HN F G+IPQ+LG LFRL+ L+L +NSL G+ P N++ CSNL
Sbjct: 105 HNSFFGKIPQKLGQLFRLQELVLIDNSLTGEIPTNLTSCSNL 146


>ref|XP_002306327.1| predicted protein [Populus trichocarpa] gi|222855776|gb|EEE93323.1|
           predicted protein [Populus trichocarpa]
          Length = 1011

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/102 (61%), Positives = 75/102 (73%)
 Frame = +1

Query: 4   DPYNITASWNDSNHFCEWEGVTCSYRHQRVRELNLTLKNLLGSISPHIGNLSFLRTLRLS 183
           DP +  +SWN S HFC+W GV C +RHQR+ ELNL    L G++SPHIGNLSFLR L L 
Sbjct: 47  DPLDALSSWNASTHFCKWSGVICGHRHQRIVELNLQSSQLTGNLSPHIGNLSFLRVLNLE 106

Query: 184 HNGFQGEIPQELGHLFRLENLILGNNSLVGKFPVNISRCSNL 309
            N F  +IPQELG LFRL+ L+LGNN+  G+ PVNIS CSNL
Sbjct: 107 GNYFSRDIPQELGRLFRLQRLVLGNNTFSGEIPVNISSCSNL 148


>ref|XP_002512884.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223547895|gb|EEF49387.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 600

 Score =  138 bits (347), Expect = 5e-31
 Identities = 64/102 (62%), Positives = 77/102 (75%)
 Frame = +1

Query: 4   DPYNITASWNDSNHFCEWEGVTCSYRHQRVRELNLTLKNLLGSISPHIGNLSFLRTLRLS 183
           DP+ I  SWNDS HFC+W G+TC  RHQRV  L+L  +NL+GSISPHIGNLSFLRTL L 
Sbjct: 51  DPHGIFNSWNDSLHFCKWYGITCGRRHQRVTSLDLKGQNLIGSISPHIGNLSFLRTLDLE 110

Query: 184 HNGFQGEIPQELGHLFRLENLILGNNSLVGKFPVNISRCSNL 309
           +N F   IPQE+G LFRL+  +L NN+L G+ P N+SRCS L
Sbjct: 111 NNSFHDHIPQEVGKLFRLQYFLLNNNTLQGEVPSNLSRCSQL 152


>ref|XP_002316397.1| predicted protein [Populus trichocarpa] gi|222865437|gb|EEF02568.1|
           predicted protein [Populus trichocarpa]
          Length = 1065

 Score =  136 bits (342), Expect = 2e-30
 Identities = 63/102 (61%), Positives = 75/102 (73%)
 Frame = +1

Query: 4   DPYNITASWNDSNHFCEWEGVTCSYRHQRVRELNLTLKNLLGSISPHIGNLSFLRTLRLS 183
           DP    +SWN+S HFCEW GVTC  +HQRV +L+L    L GS+SPH+GN+SFLRTL L 
Sbjct: 48  DPLGKLSSWNESTHFCEWSGVTCGKKHQRVVQLDLQSCKLSGSLSPHVGNMSFLRTLNLE 107

Query: 184 HNGFQGEIPQELGHLFRLENLILGNNSLVGKFPVNISRCSNL 309
           +N F   IPQELG LFRL+ L+L NNS  G+ P NISRCSNL
Sbjct: 108 NNSFGQNIPQELGSLFRLQALVLTNNSFSGEIPANISRCSNL 149


Top