BLASTX nr result

ID: Coptis24_contig00032730 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032730
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321836.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_002318880.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
ref|XP_002263511.1| PREDICTED: 21 kDa protein-like [Vitis vinifera]   112   4e-23
emb|CAN79278.1| hypothetical protein VITISV_005236 [Vitis vinifera]   112   4e-23
ref|XP_003635233.1| PREDICTED: 21 kDa protein-like [Vitis vinifera]   111   7e-23

>ref|XP_002321836.1| predicted protein [Populus trichocarpa] gi|222868832|gb|EEF05963.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/124 (46%), Positives = 81/124 (65%), Gaps = 3/124 (2%)
 Frame = -1

Query: 365 LIGVLVLCTEMKAFSASGATNTYNTTK---YTQFIQTSCNETTYPQLCVKSLSSYSNKIK 195
           L+   +LC        S A  T  TT    YT +++T+CN TTYPQLC+KSLSSY++ IK
Sbjct: 17  LLFTFLLCISSSNVQTSSAAITTTTTPSITYTNYLKTACNSTTYPQLCLKSLSSYTSTIK 76

Query: 194 ANPQKLAYTALSLSLKSAKNTSSVVSKLSQQSNLKRNERAAIKDCVENISESIDELRQSV 15
            N  KL  TAL+++LK++ NTS +V  LS+   L + E A I+DC+E I  SIDE++QSV
Sbjct: 77  TNELKLCSTALTVALKASSNTSKLVKSLSKIRGLSKTEAAIIRDCIEEIGNSIDEIKQSV 136

Query: 14  KEIK 3
           K ++
Sbjct: 137 KVLR 140


>ref|XP_002318880.1| predicted protein [Populus trichocarpa] gi|222859553|gb|EEE97100.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  114 bits (285), Expect = 8e-24
 Identities = 61/120 (50%), Positives = 80/120 (66%)
 Frame = -1

Query: 365 LIGVLVLCTEMKAFSASGATNTYNTTKYTQFIQTSCNETTYPQLCVKSLSSYSNKIKANP 186
           L+  L+LC        S A  T  T  YT ++QT+CN TTYPQLC KSLSSY++ IK N 
Sbjct: 17  LLLTLLLCISTNV-QLSLADTTSKT--YTNYLQTACNSTTYPQLCFKSLSSYTSTIKTNY 73

Query: 185 QKLAYTALSLSLKSAKNTSSVVSKLSQQSNLKRNERAAIKDCVENISESIDELRQSVKEI 6
            KL  TAL+++LK+A NTSS+V  LS+Q  L + E   +KDC+E I +SIDEL QS+K +
Sbjct: 74  LKLCRTALTVTLKAASNTSSLVKALSKQKGLSKTEAGIVKDCIEEIGDSIDELNQSLKAL 133


>ref|XP_002263511.1| PREDICTED: 21 kDa protein-like [Vitis vinifera]
          Length = 211

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/107 (49%), Positives = 79/107 (73%)
 Frame = -1

Query: 323 SASGATNTYNTTKYTQFIQTSCNETTYPQLCVKSLSSYSNKIKANPQKLAYTALSLSLKS 144
           ++S  T+T + T   QFI+TSCN TTYP +C KSLSSY++K++ +P KLA  AL++SLK+
Sbjct: 31  TSSANTSTISLTISKQFIKTSCNSTTYPGVCYKSLSSYASKVQTSPLKLANVALTVSLKA 90

Query: 143 AKNTSSVVSKLSQQSNLKRNERAAIKDCVENISESIDELRQSVKEIK 3
           A+N SS ++ L ++  + R E + +KDCVEN  + IDEL+QS++E K
Sbjct: 91  ARNASSTITLLLERKGMTRMETSIVKDCVENFGDCIDELQQSLQEFK 137


>emb|CAN79278.1| hypothetical protein VITISV_005236 [Vitis vinifera]
          Length = 211

 Score =  112 bits (279), Expect = 4e-23
 Identities = 53/107 (49%), Positives = 79/107 (73%)
 Frame = -1

Query: 323 SASGATNTYNTTKYTQFIQTSCNETTYPQLCVKSLSSYSNKIKANPQKLAYTALSLSLKS 144
           ++S  T+T + T   QFI+TSCN TTYP +C KSLSSY++K++ +P KLA  AL++SLK+
Sbjct: 31  TSSANTSTISLTISKQFIKTSCNSTTYPGVCYKSLSSYASKVQTSPLKLANVALTVSLKA 90

Query: 143 AKNTSSVVSKLSQQSNLKRNERAAIKDCVENISESIDELRQSVKEIK 3
           A+N SS ++ L ++  + R E + +KDCVEN  + IDEL+QS++E K
Sbjct: 91  ARNASSTITLLLERKGMTRMETSIVKDCVENFGDCIDELQQSLQEFK 137


>ref|XP_003635233.1| PREDICTED: 21 kDa protein-like [Vitis vinifera]
          Length = 204

 Score =  111 bits (277), Expect = 7e-23
 Identities = 59/118 (50%), Positives = 88/118 (74%)
 Frame = -1

Query: 356 VLVLCTEMKAFSASGATNTYNTTKYTQFIQTSCNETTYPQLCVKSLSSYSNKIKANPQKL 177
           +L L T M + SA+GAT     T   +FIQ SC+ T YP+LC+ SLSSY++KI+++P+ L
Sbjct: 16  LLRLTTYMNSCSAAGATPGETNT---EFIQKSCHVTPYPRLCISSLSSYASKIESSPKLL 72

Query: 176 AYTALSLSLKSAKNTSSVVSKLSQQSNLKRNERAAIKDCVENISESIDELRQSVKEIK 3
           A TALS+SL++A +TS+ ++KLS+   L+  E AAI DCVE I +S+DEL++S++E+K
Sbjct: 73  AVTALSMSLETALSTSTAITKLSKIHGLQPAEAAAISDCVEQIRDSVDELQRSLQEMK 130


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