BLASTX nr result

ID: Coptis24_contig00032711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032711
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN65440.1| hypothetical protein VITISV_011417 [Vitis vinifera]    74   2e-11
ref|XP_003521924.1| PREDICTED: uncharacterized protein LOC100810...    55   5e-06

>emb|CAN65440.1| hypothetical protein VITISV_011417 [Vitis vinifera]
          Length = 345

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/77 (55%), Positives = 55/77 (71%), Gaps = 1/77 (1%)
 Frame = -1

Query: 303 SSEYITGFRXXXXXXXXXXXGEGYASEHGFMDPMMGWMDSPEQKLGLADNELTRSKRFKV 124
           S+E++ GFR           GE  ASE GF+D MMGW+DSPE  L ++ +E++RSKRFKV
Sbjct: 270 STEWV-GFRQHGLDSDGSDIGEISASEQGFVDQMMGWIDSPE--LSISTSEVSRSKRFKV 326

Query: 123 SSSVMVPPTFS-APYIG 76
           SSSV+VPPTFS +PY G
Sbjct: 327 SSSVVVPPTFSGSPYNG 343


>ref|XP_003521924.1| PREDICTED: uncharacterized protein LOC100810022 [Glycine max]
          Length = 341

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 27/54 (50%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
 Frame = -1

Query: 240 EGYASEHGFMDPMMGWMDSPEQKLGLADNELTRSKRFKVSSSVMVPPTFS-APY 82
           E    + GF++ +MGW++SP+       +E +RSKRFKVSSSV+VPPTF+ +PY
Sbjct: 251 EASVGDQGFLEQLMGWVESPD-----VSDEGSRSKRFKVSSSVLVPPTFTGSPY 299


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