BLASTX nr result

ID: Coptis24_contig00032695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032695
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002537028.1| conserved hypothetical protein [Ricinus comm...   114   6e-24
emb|CBI31467.3| unnamed protein product [Vitis vinifera]              114   8e-24
ref|XP_002274266.1| PREDICTED: tyrosine-specific transport prote...   114   8e-24
emb|CAN75174.1| hypothetical protein VITISV_029220 [Vitis vinifera]   114   8e-24
ref|XP_002315302.1| predicted protein [Populus trichocarpa] gi|2...   113   1e-23

>ref|XP_002537028.1| conserved hypothetical protein [Ricinus communis]
           gi|223517761|gb|EEF25355.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 154

 Score =  114 bits (286), Expect = 6e-24
 Identities = 60/101 (59%), Positives = 70/101 (69%)
 Frame = -3

Query: 455 ATAMTVAPPLFVSTNVPDVFSAATDVAGGYCMTMLYGVLPPAMAWAMLTRSSDNVGDEVE 276
           A AM VAP L VSTNVPD FSAATD+AGGYCMTMLYGVLPPAMAWAM  R  ++  ++V 
Sbjct: 64  AMAMVVAPTLLVSTNVPDAFSAATDIAGGYCMTMLYGVLPPAMAWAMYDREKEDTKEKV- 122

Query: 275 KIKDGTRFTLSTLKPALIGLGLFAYAFVVEQILQDLSALYL 153
                    L   KPAL+G+G+FA   +VEQI Q  S L+L
Sbjct: 123 ---------LWKAKPALVGVGIFACGIMVEQIFQYFSELHL 154


>emb|CBI31467.3| unnamed protein product [Vitis vinifera]
          Length = 510

 Score =  114 bits (285), Expect = 8e-24
 Identities = 61/100 (61%), Positives = 69/100 (69%)
 Frame = -3

Query: 455 ATAMTVAPPLFVSTNVPDVFSAATDVAGGYCMTMLYGVLPPAMAWAMLTRSSDNVGDEVE 276
           A AM VAP L VS  VPD FSAATD+AGGYCMTMLYGVLPPAMAWAM  R          
Sbjct: 420 AMAMVVAPTLLVSATVPDAFSAATDIAGGYCMTMLYGVLPPAMAWAMHNR---------- 469

Query: 275 KIKDGTRFTLSTLKPALIGLGLFAYAFVVEQILQDLSALY 156
           + +D  +  LS  +PAL+GLGLFA   V+EQI QDLS L+
Sbjct: 470 ECEDTNQKALSRARPALLGLGLFACGIVMEQIYQDLSLLH 509


>ref|XP_002274266.1| PREDICTED: tyrosine-specific transport protein-like [Vitis
           vinifera]
          Length = 509

 Score =  114 bits (285), Expect = 8e-24
 Identities = 61/100 (61%), Positives = 69/100 (69%)
 Frame = -3

Query: 455 ATAMTVAPPLFVSTNVPDVFSAATDVAGGYCMTMLYGVLPPAMAWAMLTRSSDNVGDEVE 276
           A AM VAP L VS  VPD FSAATD+AGGYCMTMLYGVLPPAMAWAM  R          
Sbjct: 419 AMAMVVAPTLLVSATVPDAFSAATDIAGGYCMTMLYGVLPPAMAWAMHNR---------- 468

Query: 275 KIKDGTRFTLSTLKPALIGLGLFAYAFVVEQILQDLSALY 156
           + +D  +  LS  +PAL+GLGLFA   V+EQI QDLS L+
Sbjct: 469 ECEDTNQKALSRARPALLGLGLFACGIVMEQIYQDLSLLH 508


>emb|CAN75174.1| hypothetical protein VITISV_029220 [Vitis vinifera]
          Length = 438

 Score =  114 bits (285), Expect = 8e-24
 Identities = 61/100 (61%), Positives = 69/100 (69%)
 Frame = -3

Query: 455 ATAMTVAPPLFVSTNVPDVFSAATDVAGGYCMTMLYGVLPPAMAWAMLTRSSDNVGDEVE 276
           A AM VAP L VS  VPD FSAATD+AGGYCMTMLYGVLPPAMAWAM  R          
Sbjct: 348 AMAMVVAPTLLVSATVPDAFSAATDIAGGYCMTMLYGVLPPAMAWAMHNR---------- 397

Query: 275 KIKDGTRFTLSTLKPALIGLGLFAYAFVVEQILQDLSALY 156
           + +D  +  LS  +PAL+GLGLFA   V+EQI QDLS L+
Sbjct: 398 ECEDTNQKALSRARPALLGLGLFACGIVMEQIYQDLSLLH 437


>ref|XP_002315302.1| predicted protein [Populus trichocarpa] gi|222864342|gb|EEF01473.1|
           predicted protein [Populus trichocarpa]
          Length = 501

 Score =  113 bits (283), Expect = 1e-23
 Identities = 59/100 (59%), Positives = 71/100 (71%)
 Frame = -3

Query: 455 ATAMTVAPPLFVSTNVPDVFSAATDVAGGYCMTMLYGVLPPAMAWAMLTRSSDNVGDEVE 276
           A AM VAP L VST VPD FSAATD+AGGYCMT+LYGVLPPAMAWAM  +  +       
Sbjct: 411 AKAMAVAPTLVVSTIVPDAFSAATDIAGGYCMTILYGVLPPAMAWAMYNKERE------- 463

Query: 275 KIKDGTRFTLSTLKPALIGLGLFAYAFVVEQILQDLSALY 156
              D ++  LS ++PAL+G+G+ A   VVEQILQD SAL+
Sbjct: 464 ---DSSQNELSRVRPALLGVGILASGIVVEQILQDFSALH 500


Top