BLASTX nr result

ID: Coptis24_contig00032691 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032691
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCJ47150.1| putative GABA permease, partial [Hordeum vulgare...   199   1e-49
dbj|BAJ92672.1| predicted protein [Hordeum vulgare subsp. vulgar...   199   1e-49
ref|XP_002455926.1| hypothetical protein SORBIDRAFT_03g027370 [S...   197   1e-48
ref|XP_003569326.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   196   1e-48
ref|XP_002279978.1| PREDICTED: uncharacterized amino-acid permea...   194   6e-48

>emb|CCJ47150.1| putative GABA permease, partial [Hordeum vulgare subsp. vulgare]
          Length = 428

 Score =  199 bits (507), Expect = 1e-49
 Identities = 95/118 (80%), Positives = 106/118 (89%)
 Frame = -2

Query: 355 ISFCMALPSLGSLVAFQAMVSIATIALNIAYVLPIFFRVTLARKSFIPGPFNLGRYSILV 176
           +S CMALPSLGSLVAFQAMVSIATI L IAY LPIFFRVTLARK F+PGPFNLGRYS+LV
Sbjct: 306 VSLCMALPSLGSLVAFQAMVSIATIGLYIAYALPIFFRVTLARKHFVPGPFNLGRYSVLV 365

Query: 175 GSVAVLWVATITVLFSLPVAYPVTKDNLNYTPVVVCGLFIIIVSWWILSARHWFKGPI 2
           G VAVLWV TITVLFSLPV YPVT+D LNYTPV V GLFI++++ W++SARHWFKGP+
Sbjct: 366 GWVAVLWVVTITVLFSLPVMYPVTRDTLNYTPVAVGGLFILVLTSWVVSARHWFKGPV 423


>dbj|BAJ92672.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326529285|dbj|BAK01036.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 522

 Score =  199 bits (507), Expect = 1e-49
 Identities = 95/118 (80%), Positives = 105/118 (88%)
 Frame = -2

Query: 355 ISFCMALPSLGSLVAFQAMVSIATIALNIAYVLPIFFRVTLARKSFIPGPFNLGRYSILV 176
           +S CMALPSLGSLVAFQAMVSIATI L IAY LPIFFRVTLARK F+PGPFNLGRY +LV
Sbjct: 400 VSLCMALPSLGSLVAFQAMVSIATIGLYIAYALPIFFRVTLARKHFVPGPFNLGRYGVLV 459

Query: 175 GSVAVLWVATITVLFSLPVAYPVTKDNLNYTPVVVCGLFIIIVSWWILSARHWFKGPI 2
           G VAVLWV TITVLFSLPV YPVTKD LNYTPV V GLFI++++ W++SARHWFKGP+
Sbjct: 460 GWVAVLWVVTITVLFSLPVTYPVTKDTLNYTPVAVGGLFILVLTSWVVSARHWFKGPV 517


>ref|XP_002455926.1| hypothetical protein SORBIDRAFT_03g027370 [Sorghum bicolor]
           gi|241927901|gb|EES01046.1| hypothetical protein
           SORBIDRAFT_03g027370 [Sorghum bicolor]
          Length = 534

 Score =  197 bits (500), Expect = 1e-48
 Identities = 94/118 (79%), Positives = 104/118 (88%)
 Frame = -2

Query: 355 ISFCMALPSLGSLVAFQAMVSIATIALNIAYVLPIFFRVTLARKSFIPGPFNLGRYSILV 176
           I+ CMALPSLGSLVAFQAMVSIATI L I+Y LPI FRVTLARK F+PGPFNLGRY +LV
Sbjct: 412 IALCMALPSLGSLVAFQAMVSIATIGLYISYALPILFRVTLARKYFVPGPFNLGRYGVLV 471

Query: 175 GSVAVLWVATITVLFSLPVAYPVTKDNLNYTPVVVCGLFIIIVSWWILSARHWFKGPI 2
           G VAVLWVATITVLFSLPV YPVTKD LNYTPV V GLF++++  W+LSARHWFKGP+
Sbjct: 472 GWVAVLWVATITVLFSLPVTYPVTKDTLNYTPVAVGGLFVLVLGSWVLSARHWFKGPV 529


>ref|XP_003569326.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized amino-acid permease
           C15C4.04c-like [Brachypodium distachyon]
          Length = 614

 Score =  196 bits (499), Expect = 1e-48
 Identities = 94/118 (79%), Positives = 104/118 (88%)
 Frame = -2

Query: 355 ISFCMALPSLGSLVAFQAMVSIATIALNIAYVLPIFFRVTLARKSFIPGPFNLGRYSILV 176
           IS CMALPSLGSLVAFQAMVSIATI L IAY LPIFFRVTLARK F+PGPFNLGRY + V
Sbjct: 492 ISLCMALPSLGSLVAFQAMVSIATIGLYIAYALPIFFRVTLARKYFVPGPFNLGRYGVAV 551

Query: 175 GSVAVLWVATITVLFSLPVAYPVTKDNLNYTPVVVCGLFIIIVSWWILSARHWFKGPI 2
           G VAVLWV TITVLFSLPV YPVTKD LNYTPV V GLFI++++ W++SARHWF+GP+
Sbjct: 552 GWVAVLWVVTITVLFSLPVTYPVTKDTLNYTPVAVGGLFILVLTSWVVSARHWFRGPV 609


>ref|XP_002279978.1| PREDICTED: uncharacterized amino-acid permease C15C4.04c-like
           [Vitis vinifera]
          Length = 526

 Score =  194 bits (493), Expect = 6e-48
 Identities = 97/118 (82%), Positives = 103/118 (87%)
 Frame = -2

Query: 355 ISFCMALPSLGSLVAFQAMVSIATIALNIAYVLPIFFRVTLARKSFIPGPFNLGRYSILV 176
           ISFCMAL SLGSLVAFQAMVSIATI L IAY LPIFFRVTLARKSFIPGPFNLGRY ILV
Sbjct: 404 ISFCMALTSLGSLVAFQAMVSIATIGLYIAYALPIFFRVTLARKSFIPGPFNLGRYGILV 463

Query: 175 GSVAVLWVATITVLFSLPVAYPVTKDNLNYTPVVVCGLFIIIVSWWILSARHWFKGPI 2
           G VAVLWV TI+VLFSLPVAYP+T + LNYTPV V GL  + V+ WI+SARHWFKGPI
Sbjct: 464 GWVAVLWVITISVLFSLPVAYPITTETLNYTPVAVGGLLFLAVASWIISARHWFKGPI 521