BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032680
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [...   134   8e-30
emb|CBI39587.3| unnamed protein product [Vitis vinifera]              134   8e-30
ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [...   127   7e-28
ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...   123   2e-26
ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [...   123   2e-26

>ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [Vitis vinifera]
          Length = 348

 Score =  134 bits (337), Expect = 8e-30
 Identities = 58/73 (79%), Positives = 66/73 (90%)
 Frame = +1

Query: 1   RSGRTHQIRLHCQYLGIPIRGDVKYEGAHEWEGRAFDGHALHAESLLFDHPVTGLQVEFQ 180
           RSGRTHQIRLHCQYLGI IRGDVKYEG HEW+G+ +DGH LHAESL F+HPVTG+ V F+
Sbjct: 273 RSGRTHQIRLHCQYLGISIRGDVKYEGVHEWKGKIYDGHELHAESLSFEHPVTGVDVAFR 332

Query: 181 APLPSWAIQALEP 219
           APLPSWA+QAL+P
Sbjct: 333 APLPSWAVQALQP 345


>emb|CBI39587.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score =  134 bits (337), Expect = 8e-30
 Identities = 58/73 (79%), Positives = 66/73 (90%)
 Frame = +1

Query: 1   RSGRTHQIRLHCQYLGIPIRGDVKYEGAHEWEGRAFDGHALHAESLLFDHPVTGLQVEFQ 180
           RSGRTHQIRLHCQYLGI IRGDVKYEG HEW+G+ +DGH LHAESL F+HPVTG+ V F+
Sbjct: 199 RSGRTHQIRLHCQYLGISIRGDVKYEGVHEWKGKIYDGHELHAESLSFEHPVTGVDVAFR 258

Query: 181 APLPSWAIQALEP 219
           APLPSWA+QAL+P
Sbjct: 259 APLPSWAVQALQP 271


>ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223548464|gb|EEF49955.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 321

 Score =  127 bits (320), Expect = 7e-28
 Identities = 56/74 (75%), Positives = 65/74 (87%)
 Frame = +1

Query: 1   RSGRTHQIRLHCQYLGIPIRGDVKYEGAHEWEGRAFDGHALHAESLLFDHPVTGLQVEFQ 180
           +SGRTHQIRLHCQYLGI IRGDVKYEG +EWEGR +DGH LHAE+L F+HPVTG+ V  +
Sbjct: 248 QSGRTHQIRLHCQYLGISIRGDVKYEGVYEWEGRTYDGHELHAETLSFEHPVTGVPVMLR 307

Query: 181 APLPSWAIQALEPV 222
           APLPSWAIQA +P+
Sbjct: 308 APLPSWAIQASQPL 321


>ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 1-like
           [Cucumis sativus]
          Length = 366

 Score =  123 bits (308), Expect = 2e-26
 Identities = 55/73 (75%), Positives = 61/73 (83%)
 Frame = +1

Query: 1   RSGRTHQIRLHCQYLGIPIRGDVKYEGAHEWEGRAFDGHALHAESLLFDHPVTGLQVEFQ 180
           RSGRTHQIRLHCQYLGIPIRGDVKYEG  EW  + +D H LHAESL F HPVTG+ ++ Q
Sbjct: 279 RSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLKLQ 338

Query: 181 APLPSWAIQALEP 219
           APLPSWA QAL+P
Sbjct: 339 APLPSWASQALQP 351


>ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [Cucumis sativus]
          Length = 366

 Score =  123 bits (308), Expect = 2e-26
 Identities = 55/73 (75%), Positives = 61/73 (83%)
 Frame = +1

Query: 1   RSGRTHQIRLHCQYLGIPIRGDVKYEGAHEWEGRAFDGHALHAESLLFDHPVTGLQVEFQ 180
           RSGRTHQIRLHCQYLGIPIRGDVKYEG  EW  + +D H LHAESL F HPVTG+ ++ Q
Sbjct: 279 RSGRTHQIRLHCQYLGIPIRGDVKYEGVTEWNEKIYDSHELHAESLYFVHPVTGIPLKLQ 338

Query: 181 APLPSWAIQALEP 219
           APLPSWA QAL+P
Sbjct: 339 APLPSWASQALQP 351