BLASTX nr result

ID: Coptis24_contig00032647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032647
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40096.3| unnamed protein product [Vitis vinifera]              215   7e-54
ref|XP_002531310.1| tRNA-specific adenosine deaminase subunit TA...   212   6e-53
ref|XP_004146335.1| PREDICTED: tRNA-specific adenosine deaminase...   208   8e-52
ref|XP_003561681.1| PREDICTED: tRNA-specific adenosine deaminase...   204   2e-50
ref|NP_001049964.1| Os03g0321900 [Oryza sativa Japonica Group] g...   202   6e-50

>emb|CBI40096.3| unnamed protein product [Vitis vinifera]
          Length = 205

 Score =  215 bits (548), Expect = 7e-54
 Identities = 110/185 (59%), Positives = 128/185 (69%)
 Frame = +2

Query: 92  LQMASFGEEKTADTLAFMELAMQQANLALENLQVPIGCVFVENGKAIXXXXXXXXXXXXX 271
           +QMAS GEE    TLAFMELA+QQA LAL++L+VP+GCV VE+GK I             
Sbjct: 14  VQMASLGEENLPGTLAFMELAIQQAKLALDSLEVPVGCVIVEDGKLIATGRNRTTETRNA 73

Query: 272 XXXXXMEAIDDLLRNWQEIGLSATEIEGKLSRCDLYVTCEPCIMCASALSILGIRAVYYD 451
                MEAID LL  WQ+ GLS  E+    S+C LYVTCEPCIMCA++LSILGI+ VYY 
Sbjct: 74  TRHAEMEAIDVLLEQWQKNGLSKLEVAEIFSKCSLYVTCEPCIMCAASLSILGIKEVYYG 133

Query: 452 CANDKFGGCGXXXXXXXXXXDKHRSNGVSQGKGFKCTGGIMASEAISLLARFFEQGNPNA 631
           CANDKFGGCG           K  ++G    KGFKCTGGIMA+EA+SLL RF+EQGNPNA
Sbjct: 134 CANDKFGGCG-SILSLHSSSSKLLTSGTPLVKGFKCTGGIMATEAVSLLQRFYEQGNPNA 192

Query: 632 PKPHR 646
           PKPHR
Sbjct: 193 PKPHR 197


>ref|XP_002531310.1| tRNA-specific adenosine deaminase subunit TAD2, putative [Ricinus
           communis] gi|223529101|gb|EEF31082.1| tRNA-specific
           adenosine deaminase subunit TAD2, putative [Ricinus
           communis]
          Length = 223

 Score =  212 bits (540), Expect = 6e-53
 Identities = 104/179 (58%), Positives = 125/179 (69%)
 Frame = +2

Query: 122 TADTLAFMELAMQQANLALENLQVPIGCVFVENGKAIXXXXXXXXXXXXXXXXXXMEAID 301
           +++T A+MELA++QA  AL++L+VP+GCV VE+GK I                  MEAID
Sbjct: 40  SSETFAYMELALEQARHALDSLEVPVGCVIVEDGKVIASGRNRTTETRNATRHAEMEAID 99

Query: 302 DLLRNWQEIGLSATEIEGKLSRCDLYVTCEPCIMCASALSILGIRAVYYDCANDKFGGCG 481
            LL  WQ+ GLS +E+  K S+C LYVTCEPCIMCA+ALSILGI  VYY CANDKFGGCG
Sbjct: 100 VLLEQWQKGGLSVSEVAEKFSKCVLYVTCEPCIMCAAALSILGIEEVYYGCANDKFGGCG 159

Query: 482 XXXXXXXXXXDKHRSNGVSQGKGFKCTGGIMASEAISLLARFFEQGNPNAPKPHRPLQI 658
                         S  V+QGKGFKCTGGIMASEA+SLL  F+EQGNPNAPKPHRP+ +
Sbjct: 160 SILPLHSSSTQSLTSGVVAQGKGFKCTGGIMASEAVSLLRCFYEQGNPNAPKPHRPVNL 218


>ref|XP_004146335.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Cucumis
           sativus]
          Length = 191

 Score =  208 bits (530), Expect = 8e-52
 Identities = 106/185 (57%), Positives = 123/185 (66%)
 Frame = +2

Query: 98  MASFGEEKTADTLAFMELAMQQANLALENLQVPIGCVFVENGKAIXXXXXXXXXXXXXXX 277
           M S  E+ ++DTL FMELA+QQA LAL NL+VP+GCV VE+G  I               
Sbjct: 1   MDSSVEDCSSDTLRFMELAIQQAKLALNNLEVPVGCVIVEDGMVIATGRNRTTETRNATR 60

Query: 278 XXXMEAIDDLLRNWQEIGLSATEIEGKLSRCDLYVTCEPCIMCASALSILGIRAVYYDCA 457
              MEAID L+  WQ  GLS +E+  K S+C LYVTCEPCIMCASALSI+GI+ VYY CA
Sbjct: 61  HAEMEAIDILIEAWQRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSIIGIKEVYYGCA 120

Query: 458 NDKFGGCGXXXXXXXXXXDKHRSNGVSQGKGFKCTGGIMASEAISLLARFFEQGNPNAPK 637
           NDKFGGCG          +   S G   G+GFKCT GIMASEA+ L   F+EQGNPNAPK
Sbjct: 121 NDKFGGCGSILSLHLGSGEAPTS-GNGLGRGFKCTAGIMASEAVGLFRSFYEQGNPNAPK 179

Query: 638 PHRPL 652
           PHRPL
Sbjct: 180 PHRPL 184


>ref|XP_003561681.1| PREDICTED: tRNA-specific adenosine deaminase 2-like [Brachypodium
           distachyon]
          Length = 223

 Score =  204 bits (518), Expect = 2e-50
 Identities = 100/184 (54%), Positives = 121/184 (65%), Gaps = 1/184 (0%)
 Frame = +2

Query: 119 KTADTLAFMELAMQQANLALENLQVPIGCVFVENGKAIXXXXXXXXXXXXXXXXXXMEAI 298
           +  +   FM+LA+ QA  AL NL+VP+GCV VENGK I                  MEAI
Sbjct: 40  RAMEATVFMKLALDQAKFALNNLEVPVGCVIVENGKVISSGSNRTNATRNATRHAEMEAI 99

Query: 299 DDLLRNWQEIGLSATEIEGKLSRCDLYVTCEPCIMCASALSILGIRAVYYDCANDKFGGC 478
           DDLLR WQ +GL  T+   K + CDLYVTCEPCIMCASALSILGIR VY+ CANDKFGGC
Sbjct: 100 DDLLREWQSMGLDQTQTAEKFAGCDLYVTCEPCIMCASALSILGIREVYFGCANDKFGGC 159

Query: 479 GXXXXXXXXXXDKHRSNGVS-QGKGFKCTGGIMASEAISLLARFFEQGNPNAPKPHRPLQ 655
           G              S G + + +GFKCTGGIMA EA++L   F+EQGNPNAPKPHRP++
Sbjct: 160 GSVMSLHENSSLDDLSGGHNPRLRGFKCTGGIMAEEAVALFRNFYEQGNPNAPKPHRPVR 219

Query: 656 ISKR 667
           + ++
Sbjct: 220 VDQQ 223


>ref|NP_001049964.1| Os03g0321900 [Oryza sativa Japonica Group]
           gi|108707878|gb|ABF95673.1| Cytidine and deoxycytidylate
           deaminase zinc-binding region family protein, expressed
           [Oryza sativa Japonica Group]
           gi|113548435|dbj|BAF11878.1| Os03g0321900 [Oryza sativa
           Japonica Group] gi|218192723|gb|EEC75150.1| hypothetical
           protein OsI_11352 [Oryza sativa Indica Group]
          Length = 183

 Score =  202 bits (514), Expect = 6e-50
 Identities = 97/174 (55%), Positives = 117/174 (67%)
 Frame = +2

Query: 140 FMELAMQQANLALENLQVPIGCVFVENGKAIXXXXXXXXXXXXXXXXXXMEAIDDLLRNW 319
           FMELA++QA  AL+NL+VP+GCV VE+GK I                  MEAID LLR W
Sbjct: 8   FMELALEQAKFALDNLEVPVGCVIVEDGKVISSGSNKTNATRNATRHAEMEAIDILLREW 67

Query: 320 QEIGLSATEIEGKLSRCDLYVTCEPCIMCASALSILGIRAVYYDCANDKFGGCGXXXXXX 499
           Q +GL   ++  K +RCDLYVTCEPCIMCA ALSILGIR VY+ CANDKFGGCG      
Sbjct: 68  QGMGLDQPQVAEKFARCDLYVTCEPCIMCAMALSILGIREVYFGCANDKFGGCGSIMSLH 127

Query: 500 XXXXDKHRSNGVSQGKGFKCTGGIMASEAISLLARFFEQGNPNAPKPHRPLQIS 661
                +     +   KG+KCTGGIMA EA++L   F+EQGNPNAPKPHRP++I+
Sbjct: 128 QSSSAELSGEEIPGPKGYKCTGGIMAEEAVALFRNFYEQGNPNAPKPHRPVRIA 181


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