BLASTX nr result

ID: Coptis24_contig00032646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032646
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326146.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
emb|CBI27754.3| unnamed protein product [Vitis vinifera]              134   8e-30
ref|XP_002275046.1| PREDICTED: uncharacterized protein LOC100254...   134   8e-30
dbj|BAB86284.1| kinesin-like protein NACK2 [Nicotiana tabacum]        132   3e-29
ref|XP_002875601.1| hypothetical protein ARALYDRAFT_323079 [Arab...   131   6e-29

>ref|XP_002326146.1| predicted protein [Populus trichocarpa] gi|222833339|gb|EEE71816.1|
            predicted protein [Populus trichocarpa]
          Length = 952

 Score =  136 bits (343), Expect = 2e-30
 Identities = 60/77 (77%), Positives = 72/77 (93%)
 Frame = +2

Query: 2    EVPPGGKQRRLQLVNKLWTDPHNMQHVRDSAEVVAKLVGFCESKENASKEMFQLSFVSPC 181
            E+P GGKQRRLQLVNKLWTDP NMQH+++SAE+VAKLVGFCES E+ SKEMF+L+F +PC
Sbjct: 876  EIPQGGKQRRLQLVNKLWTDPLNMQHIKESAEIVAKLVGFCESGEHVSKEMFELNFANPC 935

Query: 182  DKKSWMGWNLISNLLHL 232
            DKK+WMGWNLIS+LL+L
Sbjct: 936  DKKTWMGWNLISSLLNL 952


>emb|CBI27754.3| unnamed protein product [Vitis vinifera]
          Length = 942

 Score =  134 bits (337), Expect = 8e-30
 Identities = 60/77 (77%), Positives = 70/77 (90%)
 Frame = +2

Query: 2    EVPPGGKQRRLQLVNKLWTDPHNMQHVRDSAEVVAKLVGFCESKENASKEMFQLSFVSPC 181
            E+P  GKQRRLQLVNKLWTDPHNM+H+++SAE+VAKLVGFCES E+ SKEMF+L+FVS  
Sbjct: 866  EIPAVGKQRRLQLVNKLWTDPHNMEHIKESAEIVAKLVGFCESGEHVSKEMFELNFVSHS 925

Query: 182  DKKSWMGWNLISNLLHL 232
            D+K WMGWNLISNLLHL
Sbjct: 926  DRKPWMGWNLISNLLHL 942


>ref|XP_002275046.1| PREDICTED: uncharacterized protein LOC100254378 [Vitis vinifera]
          Length = 943

 Score =  134 bits (337), Expect = 8e-30
 Identities = 60/77 (77%), Positives = 70/77 (90%)
 Frame = +2

Query: 2    EVPPGGKQRRLQLVNKLWTDPHNMQHVRDSAEVVAKLVGFCESKENASKEMFQLSFVSPC 181
            E+P  GKQRRLQLVNKLWTDPHNM+H+++SAE+VAKLVGFCES E+ SKEMF+L+FVS  
Sbjct: 867  EIPAVGKQRRLQLVNKLWTDPHNMEHIKESAEIVAKLVGFCESGEHVSKEMFELNFVSHS 926

Query: 182  DKKSWMGWNLISNLLHL 232
            D+K WMGWNLISNLLHL
Sbjct: 927  DRKPWMGWNLISNLLHL 943


>dbj|BAB86284.1| kinesin-like protein NACK2 [Nicotiana tabacum]
          Length = 955

 Score =  132 bits (332), Expect = 3e-29
 Identities = 63/78 (80%), Positives = 72/78 (92%), Gaps = 1/78 (1%)
 Frame = +2

Query: 2    EVPPGGKQRR-LQLVNKLWTDPHNMQHVRDSAEVVAKLVGFCESKENASKEMFQLSFVSP 178
            ++PP GKQRR LQLVNKLW+DP NMQ+VRDSAEVVAKLVGFCE+ E+ SKEMFQL+FVSP
Sbjct: 878  DIPPDGKQRRRLQLVNKLWSDPLNMQNVRDSAEVVAKLVGFCETGEHVSKEMFQLNFVSP 937

Query: 179  CDKKSWMGWNLISNLLHL 232
             DKK+W+GWNLISNLLHL
Sbjct: 938  SDKKTWIGWNLISNLLHL 955


>ref|XP_002875601.1| hypothetical protein ARALYDRAFT_323079 [Arabidopsis lyrata subsp.
            lyrata] gi|297321439|gb|EFH51860.1| hypothetical protein
            ARALYDRAFT_323079 [Arabidopsis lyrata subsp. lyrata]
          Length = 942

 Score =  131 bits (329), Expect = 6e-29
 Identities = 60/78 (76%), Positives = 68/78 (87%), Gaps = 1/78 (1%)
 Frame = +2

Query: 2    EVPPGGKQRRLQLVNKLWTDPHNMQHVRDSAEVVAKLVGFCESKENASKEMFQLSFVSPC 181
            +VPP GKQRR Q +NKLWTDPHNMQHVR+SAE+VAKLVGFC+S EN  KEMF+L+F SP 
Sbjct: 865  DVPPVGKQRRQQFINKLWTDPHNMQHVRESAEIVAKLVGFCDSGENIRKEMFELNFASPS 924

Query: 182  DKKSW-MGWNLISNLLHL 232
            DKK+W MGWN ISNLLHL
Sbjct: 925  DKKTWMMGWNFISNLLHL 942


Top