BLASTX nr result

ID: Coptis24_contig00032626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032626
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635666.1| PREDICTED: protein transport protein Sec61 s...   433   e-119
ref|XP_003635558.1| PREDICTED: protein transport protein Sec61 s...   433   e-119
ref|XP_002331716.1| Sec61 transport protein [Populus trichocarpa...   432   e-119
ref|XP_002316850.1| Sec61 transport protein [Populus trichocarpa...   432   e-119
ref|XP_002285514.1| PREDICTED: protein transport protein Sec61 s...   432   e-119

>ref|XP_003635666.1| PREDICTED: protein transport protein Sec61 subunit alpha-like,
           partial [Vitis vinifera]
          Length = 314

 Score =  433 bits (1113), Expect = e-119
 Identities = 218/246 (88%), Positives = 233/246 (94%)
 Frame = +3

Query: 3   KTPFRVRVMYTVVALFIFLVCSQLPLYGIHSTTGADPFYWIRVILASSRGTVMELGITPI 182
           K PFR +V+YTV++LFIFLVCSQLPLYGIHSTTGADPFYW+RVILASSRGTVMELGITPI
Sbjct: 27  KIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASSRGTVMELGITPI 86

Query: 183 VTSGLVMQMLAGLKIIEVDNSVREDRALLNGAQKLLGILIAAGQAVVYVLSGMYGSVDQL 362
           VTSGLVMQ+LAG KIIEVDN+VREDRALLNGAQKLLGILIA G+AV YVLSGMYGSV QL
Sbjct: 87  VTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVSQL 146

Query: 363 GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESVIWKAFSPATINT 542
           GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICE++IWKAFSP TIN+
Sbjct: 147 GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINS 206

Query: 543 GRGTEFEGAIVALFHLLITRTDKVHALREAFYRQNLPNVTNLLATFLIFGIVNYFQGFRV 722
           GRG EFEGA++ALFHLLITRTDKV ALREAFYRQNLPNVTNLLAT LIF IV YFQGFRV
Sbjct: 207 GRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRV 266

Query: 723 DLPMKS 740
            LP++S
Sbjct: 267 VLPVRS 272


>ref|XP_003635558.1| PREDICTED: protein transport protein Sec61 subunit alpha-like,
           partial [Vitis vinifera]
          Length = 304

 Score =  433 bits (1113), Expect = e-119
 Identities = 218/246 (88%), Positives = 233/246 (94%)
 Frame = +3

Query: 3   KTPFRVRVMYTVVALFIFLVCSQLPLYGIHSTTGADPFYWIRVILASSRGTVMELGITPI 182
           K PFR +V+YTV++LFIFLVCSQLPLYGIHSTTGADPFYW+RVILASSRGTVMELGITPI
Sbjct: 27  KIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASSRGTVMELGITPI 86

Query: 183 VTSGLVMQMLAGLKIIEVDNSVREDRALLNGAQKLLGILIAAGQAVVYVLSGMYGSVDQL 362
           VTSGLVMQ+LAG KIIEVDN+VREDRALLNGAQKLLGILIA G+AV YVLSGMYGSV QL
Sbjct: 87  VTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVSQL 146

Query: 363 GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESVIWKAFSPATINT 542
           GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICE++IWKAFSP TIN+
Sbjct: 147 GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINS 206

Query: 543 GRGTEFEGAIVALFHLLITRTDKVHALREAFYRQNLPNVTNLLATFLIFGIVNYFQGFRV 722
           GRG EFEGA++ALFHLLITRTDKV ALREAFYRQNLPNVTNLLAT LIF IV YFQGFRV
Sbjct: 207 GRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRV 266

Query: 723 DLPMKS 740
            LP++S
Sbjct: 267 VLPVRS 272


>ref|XP_002331716.1| Sec61 transport protein [Populus trichocarpa]
           gi|222874322|gb|EEF11453.1| Sec61 transport protein
           [Populus trichocarpa]
          Length = 476

 Score =  432 bits (1111), Expect = e-119
 Identities = 217/246 (88%), Positives = 233/246 (94%)
 Frame = +3

Query: 3   KTPFRVRVMYTVVALFIFLVCSQLPLYGIHSTTGADPFYWIRVILASSRGTVMELGITPI 182
           K PFR +V+YTV+ALFIFLVCSQLPLYGIHSTTGADPFYW+RVILAS+RGTVMELGITPI
Sbjct: 27  KIPFREKVIYTVIALFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPI 86

Query: 183 VTSGLVMQMLAGLKIIEVDNSVREDRALLNGAQKLLGILIAAGQAVVYVLSGMYGSVDQL 362
           VTSGLVMQ+LAG KIIEVDN+VREDRALLNGAQKLLGILIA G+AV YVLSGMYGSV QL
Sbjct: 87  VTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVGQL 146

Query: 363 GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESVIWKAFSPATINT 542
           GVGNAILII+QLCFAGIIVICLDELLQKGYGLGSGISLFIATNICE++IWKAFSP TIN+
Sbjct: 147 GVGNAILIIIQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINS 206

Query: 543 GRGTEFEGAIVALFHLLITRTDKVHALREAFYRQNLPNVTNLLATFLIFGIVNYFQGFRV 722
           GRG EFEGA++ALFHLLITRTDKV ALREAFYRQNLPNVTNLLAT LIF IV YFQGFRV
Sbjct: 207 GRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRV 266

Query: 723 DLPMKS 740
            LP++S
Sbjct: 267 VLPVRS 272


>ref|XP_002316850.1| Sec61 transport protein [Populus trichocarpa]
           gi|118487035|gb|ABK95348.1| unknown [Populus
           trichocarpa] gi|222859915|gb|EEE97462.1| Sec61 transport
           protein [Populus trichocarpa]
          Length = 476

 Score =  432 bits (1111), Expect = e-119
 Identities = 217/246 (88%), Positives = 233/246 (94%)
 Frame = +3

Query: 3   KTPFRVRVMYTVVALFIFLVCSQLPLYGIHSTTGADPFYWIRVILASSRGTVMELGITPI 182
           K PFR +V+YTV+ALFIFLVCSQLPLYGIHSTTGADPFYW+RVILAS+RGTVMELGITPI
Sbjct: 27  KIPFREKVIYTVIALFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPI 86

Query: 183 VTSGLVMQMLAGLKIIEVDNSVREDRALLNGAQKLLGILIAAGQAVVYVLSGMYGSVDQL 362
           VTSGLVMQ+LAG KIIEVDN+VREDRALLNGAQKLLGILIA G+AV YVLSGMYGSV QL
Sbjct: 87  VTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVGQL 146

Query: 363 GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESVIWKAFSPATINT 542
           GVGNAILII+QLCFAGIIVICLDELLQKGYGLGSGISLFIATNICE++IWKAFSP TIN+
Sbjct: 147 GVGNAILIIIQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINS 206

Query: 543 GRGTEFEGAIVALFHLLITRTDKVHALREAFYRQNLPNVTNLLATFLIFGIVNYFQGFRV 722
           GRG EFEGA++ALFHLLITRTDKV ALREAFYRQNLPNVTNLLAT LIF IV YFQGFRV
Sbjct: 207 GRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRV 266

Query: 723 DLPMKS 740
            LP++S
Sbjct: 267 VLPVRS 272


>ref|XP_002285514.1| PREDICTED: protein transport protein Sec61 subunit alpha [Vitis
           vinifera]
          Length = 476

 Score =  432 bits (1111), Expect = e-119
 Identities = 217/246 (88%), Positives = 233/246 (94%)
 Frame = +3

Query: 3   KTPFRVRVMYTVVALFIFLVCSQLPLYGIHSTTGADPFYWIRVILASSRGTVMELGITPI 182
           K PFR +V+YTV++LFIFLVCSQLPLYGIHSTTGADPFYW+RVILAS+RGTVMELGITPI
Sbjct: 27  KVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPI 86

Query: 183 VTSGLVMQMLAGLKIIEVDNSVREDRALLNGAQKLLGILIAAGQAVVYVLSGMYGSVDQL 362
           VTSGLVMQ+LAG KIIEVDN+VREDRALLNGAQKLLGILIA G+AV YVLSGMYGSV QL
Sbjct: 87  VTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVSQL 146

Query: 363 GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESVIWKAFSPATINT 542
           GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICE++IWKAFSP TIN+
Sbjct: 147 GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINS 206

Query: 543 GRGTEFEGAIVALFHLLITRTDKVHALREAFYRQNLPNVTNLLATFLIFGIVNYFQGFRV 722
           GRG EFEGA++ALFHLLITRTDKV ALREAFYRQNLPNVTNLLAT LIF IV YFQGFRV
Sbjct: 207 GRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRV 266

Query: 723 DLPMKS 740
            LP++S
Sbjct: 267 VLPVRS 272


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