BLASTX nr result
ID: Coptis24_contig00032626
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00032626 (740 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003635666.1| PREDICTED: protein transport protein Sec61 s... 433 e-119 ref|XP_003635558.1| PREDICTED: protein transport protein Sec61 s... 433 e-119 ref|XP_002331716.1| Sec61 transport protein [Populus trichocarpa... 432 e-119 ref|XP_002316850.1| Sec61 transport protein [Populus trichocarpa... 432 e-119 ref|XP_002285514.1| PREDICTED: protein transport protein Sec61 s... 432 e-119 >ref|XP_003635666.1| PREDICTED: protein transport protein Sec61 subunit alpha-like, partial [Vitis vinifera] Length = 314 Score = 433 bits (1113), Expect = e-119 Identities = 218/246 (88%), Positives = 233/246 (94%) Frame = +3 Query: 3 KTPFRVRVMYTVVALFIFLVCSQLPLYGIHSTTGADPFYWIRVILASSRGTVMELGITPI 182 K PFR +V+YTV++LFIFLVCSQLPLYGIHSTTGADPFYW+RVILASSRGTVMELGITPI Sbjct: 27 KIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASSRGTVMELGITPI 86 Query: 183 VTSGLVMQMLAGLKIIEVDNSVREDRALLNGAQKLLGILIAAGQAVVYVLSGMYGSVDQL 362 VTSGLVMQ+LAG KIIEVDN+VREDRALLNGAQKLLGILIA G+AV YVLSGMYGSV QL Sbjct: 87 VTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVSQL 146 Query: 363 GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESVIWKAFSPATINT 542 GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICE++IWKAFSP TIN+ Sbjct: 147 GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINS 206 Query: 543 GRGTEFEGAIVALFHLLITRTDKVHALREAFYRQNLPNVTNLLATFLIFGIVNYFQGFRV 722 GRG EFEGA++ALFHLLITRTDKV ALREAFYRQNLPNVTNLLAT LIF IV YFQGFRV Sbjct: 207 GRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRV 266 Query: 723 DLPMKS 740 LP++S Sbjct: 267 VLPVRS 272 >ref|XP_003635558.1| PREDICTED: protein transport protein Sec61 subunit alpha-like, partial [Vitis vinifera] Length = 304 Score = 433 bits (1113), Expect = e-119 Identities = 218/246 (88%), Positives = 233/246 (94%) Frame = +3 Query: 3 KTPFRVRVMYTVVALFIFLVCSQLPLYGIHSTTGADPFYWIRVILASSRGTVMELGITPI 182 K PFR +V+YTV++LFIFLVCSQLPLYGIHSTTGADPFYW+RVILASSRGTVMELGITPI Sbjct: 27 KIPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASSRGTVMELGITPI 86 Query: 183 VTSGLVMQMLAGLKIIEVDNSVREDRALLNGAQKLLGILIAAGQAVVYVLSGMYGSVDQL 362 VTSGLVMQ+LAG KIIEVDN+VREDRALLNGAQKLLGILIA G+AV YVLSGMYGSV QL Sbjct: 87 VTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVSQL 146 Query: 363 GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESVIWKAFSPATINT 542 GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICE++IWKAFSP TIN+ Sbjct: 147 GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINS 206 Query: 543 GRGTEFEGAIVALFHLLITRTDKVHALREAFYRQNLPNVTNLLATFLIFGIVNYFQGFRV 722 GRG EFEGA++ALFHLLITRTDKV ALREAFYRQNLPNVTNLLAT LIF IV YFQGFRV Sbjct: 207 GRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRV 266 Query: 723 DLPMKS 740 LP++S Sbjct: 267 VLPVRS 272 >ref|XP_002331716.1| Sec61 transport protein [Populus trichocarpa] gi|222874322|gb|EEF11453.1| Sec61 transport protein [Populus trichocarpa] Length = 476 Score = 432 bits (1111), Expect = e-119 Identities = 217/246 (88%), Positives = 233/246 (94%) Frame = +3 Query: 3 KTPFRVRVMYTVVALFIFLVCSQLPLYGIHSTTGADPFYWIRVILASSRGTVMELGITPI 182 K PFR +V+YTV+ALFIFLVCSQLPLYGIHSTTGADPFYW+RVILAS+RGTVMELGITPI Sbjct: 27 KIPFREKVIYTVIALFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPI 86 Query: 183 VTSGLVMQMLAGLKIIEVDNSVREDRALLNGAQKLLGILIAAGQAVVYVLSGMYGSVDQL 362 VTSGLVMQ+LAG KIIEVDN+VREDRALLNGAQKLLGILIA G+AV YVLSGMYGSV QL Sbjct: 87 VTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVGQL 146 Query: 363 GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESVIWKAFSPATINT 542 GVGNAILII+QLCFAGIIVICLDELLQKGYGLGSGISLFIATNICE++IWKAFSP TIN+ Sbjct: 147 GVGNAILIIIQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINS 206 Query: 543 GRGTEFEGAIVALFHLLITRTDKVHALREAFYRQNLPNVTNLLATFLIFGIVNYFQGFRV 722 GRG EFEGA++ALFHLLITRTDKV ALREAFYRQNLPNVTNLLAT LIF IV YFQGFRV Sbjct: 207 GRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRV 266 Query: 723 DLPMKS 740 LP++S Sbjct: 267 VLPVRS 272 >ref|XP_002316850.1| Sec61 transport protein [Populus trichocarpa] gi|118487035|gb|ABK95348.1| unknown [Populus trichocarpa] gi|222859915|gb|EEE97462.1| Sec61 transport protein [Populus trichocarpa] Length = 476 Score = 432 bits (1111), Expect = e-119 Identities = 217/246 (88%), Positives = 233/246 (94%) Frame = +3 Query: 3 KTPFRVRVMYTVVALFIFLVCSQLPLYGIHSTTGADPFYWIRVILASSRGTVMELGITPI 182 K PFR +V+YTV+ALFIFLVCSQLPLYGIHSTTGADPFYW+RVILAS+RGTVMELGITPI Sbjct: 27 KIPFREKVIYTVIALFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPI 86 Query: 183 VTSGLVMQMLAGLKIIEVDNSVREDRALLNGAQKLLGILIAAGQAVVYVLSGMYGSVDQL 362 VTSGLVMQ+LAG KIIEVDN+VREDRALLNGAQKLLGILIA G+AV YVLSGMYGSV QL Sbjct: 87 VTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVGQL 146 Query: 363 GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESVIWKAFSPATINT 542 GVGNAILII+QLCFAGIIVICLDELLQKGYGLGSGISLFIATNICE++IWKAFSP TIN+ Sbjct: 147 GVGNAILIIIQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINS 206 Query: 543 GRGTEFEGAIVALFHLLITRTDKVHALREAFYRQNLPNVTNLLATFLIFGIVNYFQGFRV 722 GRG EFEGA++ALFHLLITRTDKV ALREAFYRQNLPNVTNLLAT LIF IV YFQGFRV Sbjct: 207 GRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRV 266 Query: 723 DLPMKS 740 LP++S Sbjct: 267 VLPVRS 272 >ref|XP_002285514.1| PREDICTED: protein transport protein Sec61 subunit alpha [Vitis vinifera] Length = 476 Score = 432 bits (1111), Expect = e-119 Identities = 217/246 (88%), Positives = 233/246 (94%) Frame = +3 Query: 3 KTPFRVRVMYTVVALFIFLVCSQLPLYGIHSTTGADPFYWIRVILASSRGTVMELGITPI 182 K PFR +V+YTV++LFIFLVCSQLPLYGIHSTTGADPFYW+RVILAS+RGTVMELGITPI Sbjct: 27 KVPFREKVIYTVISLFIFLVCSQLPLYGIHSTTGADPFYWMRVILASNRGTVMELGITPI 86 Query: 183 VTSGLVMQMLAGLKIIEVDNSVREDRALLNGAQKLLGILIAAGQAVVYVLSGMYGSVDQL 362 VTSGLVMQ+LAG KIIEVDN+VREDRALLNGAQKLLGILIA G+AV YVLSGMYGSV QL Sbjct: 87 VTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAVGEAVAYVLSGMYGSVSQL 146 Query: 363 GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICESVIWKAFSPATINT 542 GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICE++IWKAFSP TIN+ Sbjct: 147 GVGNAILIIVQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINS 206 Query: 543 GRGTEFEGAIVALFHLLITRTDKVHALREAFYRQNLPNVTNLLATFLIFGIVNYFQGFRV 722 GRG EFEGA++ALFHLLITRTDKV ALREAFYRQNLPNVTNLLAT LIF IV YFQGFRV Sbjct: 207 GRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRV 266 Query: 723 DLPMKS 740 LP++S Sbjct: 267 VLPVRS 272