BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032625
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892931.1| hypothetical protein ARALYDRAFT_471898 [Arab...   125   5e-27
ref|XP_002267875.1| PREDICTED: ATP-dependent DNA helicase 2 subu...   125   5e-27
ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus commu...   124   6e-27
gb|AAF99835.1|AC051629_2 Hypothetical protein [Arabidopsis thali...   124   8e-27
ref|NP_564012.1| ATP-dependent DNA helicase 2 subunit KU70 [Arab...   124   8e-27

>ref|XP_002892931.1| hypothetical protein ARALYDRAFT_471898 [Arabidopsis lyrata subsp.
           lyrata] gi|297338773|gb|EFH69190.1| hypothetical protein
           ARALYDRAFT_471898 [Arabidopsis lyrata subsp. lyrata]
          Length = 623

 Score =  125 bits (313), Expect = 5e-27
 Identities = 56/79 (70%), Positives = 68/79 (86%)
 Frame = -2

Query: 239 LMEEPKTRFQIYKGENIKFSTEELTQIKRVSTGHLRLLGFKPLSCLKDYYNLKPSTFIFP 60
           +M++P  R Q YK +NI F+ EEL+Q+K++STGHLRLLGFKPLSCLKDYYNLKPSTF++P
Sbjct: 323 IMQDPIQRIQPYKNQNIMFTVEELSQVKKISTGHLRLLGFKPLSCLKDYYNLKPSTFLYP 382

Query: 59  SDDEIFGSTSIFIALHRSM 3
           SD E+ GST  FIALHRSM
Sbjct: 383 SDKEVIGSTRAFIALHRSM 401


>ref|XP_002267875.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70 [Vitis
           vinifera] gi|296089629|emb|CBI39448.3| unnamed protein
           product [Vitis vinifera]
          Length = 623

 Score =  125 bits (313), Expect = 5e-27
 Identities = 55/76 (72%), Positives = 68/76 (89%)
 Frame = -2

Query: 230 EPKTRFQIYKGENIKFSTEELTQIKRVSTGHLRLLGFKPLSCLKDYYNLKPSTFIFPSDD 51
           +P  RF  YK +N+KF+TEEL+++KR+STGHLRLLGFKPLSCLKDY+NL+PSTF+FP+D 
Sbjct: 320 QPTKRFHPYKNKNVKFTTEELSEVKRISTGHLRLLGFKPLSCLKDYHNLRPSTFVFPTDK 379

Query: 50  EIFGSTSIFIALHRSM 3
           E+ GST IFIALHRSM
Sbjct: 380 EVVGSTCIFIALHRSM 395


>ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus communis]
           gi|223539210|gb|EEF40803.1| ku P70 DNA helicase,
           putative [Ricinus communis]
          Length = 626

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/79 (74%), Positives = 67/79 (84%)
 Frame = -2

Query: 239 LMEEPKTRFQIYKGENIKFSTEELTQIKRVSTGHLRLLGFKPLSCLKDYYNLKPSTFIFP 60
           L+ EP      YK ENIKFS EEL +IKR+STGHLRLLGFKPLSCL+DY+NL+PSTF+FP
Sbjct: 319 LILEPTKLSHPYKNENIKFSVEELAEIKRISTGHLRLLGFKPLSCLRDYHNLRPSTFVFP 378

Query: 59  SDDEIFGSTSIFIALHRSM 3
           SD E+ GSTSIFIALHRSM
Sbjct: 379 SDKEVIGSTSIFIALHRSM 397


>gb|AAF99835.1|AC051629_2 Hypothetical protein [Arabidopsis thaliana]
          Length = 607

 Score =  124 bits (311), Expect = 8e-27
 Identities = 56/79 (70%), Positives = 68/79 (86%)
 Frame = -2

Query: 239 LMEEPKTRFQIYKGENIKFSTEELTQIKRVSTGHLRLLGFKPLSCLKDYYNLKPSTFIFP 60
           +M++P  R Q YK +NI F+ EEL+Q+KR+STGHLRLLGFKPLSCLKDY+NLKPSTF++P
Sbjct: 295 IMQDPIQRIQPYKNQNIMFTVEELSQVKRISTGHLRLLGFKPLSCLKDYHNLKPSTFLYP 354

Query: 59  SDDEIFGSTSIFIALHRSM 3
           SD E+ GST  FIALHRSM
Sbjct: 355 SDKEVIGSTRAFIALHRSM 373


>ref|NP_564012.1| ATP-dependent DNA helicase 2 subunit KU70 [Arabidopsis thaliana]
           gi|75309289|sp|Q9FQ08.1|KU70_ARATH RecName:
           Full=ATP-dependent DNA helicase 2 subunit KU70; AltName:
           Full=ATP-dependent DNA helicase 2 subunit 1; AltName:
           Full=ATP-dependent DNA helicase II 70 kDa subunit
           gi|12006424|gb|AAG44852.1|AF283759_1 Ku70-like protein
           [Arabidopsis thaliana] gi|62320632|dbj|BAD95294.1|
           Ku70-like protein [Arabidopsis thaliana]
           gi|332191406|gb|AEE29527.1| ATP-dependent DNA helicase 2
           subunit KU70 [Arabidopsis thaliana]
          Length = 621

 Score =  124 bits (311), Expect = 8e-27
 Identities = 56/79 (70%), Positives = 68/79 (86%)
 Frame = -2

Query: 239 LMEEPKTRFQIYKGENIKFSTEELTQIKRVSTGHLRLLGFKPLSCLKDYYNLKPSTFIFP 60
           +M++P  R Q YK +NI F+ EEL+Q+KR+STGHLRLLGFKPLSCLKDY+NLKPSTF++P
Sbjct: 321 IMQDPIQRIQPYKNQNIMFTVEELSQVKRISTGHLRLLGFKPLSCLKDYHNLKPSTFLYP 380

Query: 59  SDDEIFGSTSIFIALHRSM 3
           SD E+ GST  FIALHRSM
Sbjct: 381 SDKEVIGSTRAFIALHRSM 399