BLASTX nr result

ID: Coptis24_contig00032615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032615
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311084.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31
ref|XP_002534553.1| calcium lipid binding protein, putative [Ric...   132   2e-29
ref|XP_002316376.1| predicted protein [Populus trichocarpa] gi|2...   128   5e-28
ref|XP_002272997.1| PREDICTED: extended synaptotagmin-2 [Vitis v...   126   2e-27
ref|XP_003536345.1| PREDICTED: tricalbin-2-like [Glycine max]         125   3e-27

>ref|XP_002311084.1| predicted protein [Populus trichocarpa] gi|222850904|gb|EEE88451.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/89 (73%), Positives = 78/89 (87%)
 Frame = +3

Query: 6   MIKSTEEPIFADYIGKYQIQSIEFESLTLGTLPPTIYGIKVYETNEKVLVMEPIVRWAGN 185
           MI+ T + +FA+YIGKY+IQ+IEFE LTLGTLPPTI+G+KVYETNEK LVMEP +RWAGN
Sbjct: 93  MIRRTTQSMFAEYIGKYKIQAIEFEHLTLGTLPPTIHGLKVYETNEKDLVMEPAIRWAGN 152

Query: 186 PNVTVLLKFPFLQMNVQLVDLQIFAAPRV 272
           PN+ ++LK   LQ+ VQLVDLQIFAAPRV
Sbjct: 153 PNIVLVLKLMSLQVTVQLVDLQIFAAPRV 181


>ref|XP_002534553.1| calcium lipid binding protein, putative [Ricinus communis]
           gi|223525050|gb|EEF27829.1| calcium lipid binding
           protein, putative [Ricinus communis]
          Length = 541

 Score =  132 bits (333), Expect = 2e-29
 Identities = 60/88 (68%), Positives = 76/88 (86%)
 Frame = +3

Query: 9   IKSTEEPIFADYIGKYQIQSIEFESLTLGTLPPTIYGIKVYETNEKVLVMEPIVRWAGNP 188
           I+ST EPIFA+YIG+Y I++IEFE LTLGTLPP I+G+KVYETNEK LVMEP ++WAGNP
Sbjct: 95  IRSTAEPIFAEYIGQYMIEAIEFEHLTLGTLPPVIHGLKVYETNEKDLVMEPAIKWAGNP 154

Query: 189 NVTVLLKFPFLQMNVQLVDLQIFAAPRV 272
           N+ +++K   L + VQL+DLQIFAAPR+
Sbjct: 155 NIILMIKLMSLPVRVQLIDLQIFAAPRI 182


>ref|XP_002316376.1| predicted protein [Populus trichocarpa] gi|222865416|gb|EEF02547.1|
           predicted protein [Populus trichocarpa]
          Length = 544

 Score =  128 bits (321), Expect = 5e-28
 Identities = 60/89 (67%), Positives = 76/89 (85%)
 Frame = +3

Query: 6   MIKSTEEPIFADYIGKYQIQSIEFESLTLGTLPPTIYGIKVYETNEKVLVMEPIVRWAGN 185
           MI+ST +P+FA+YIGKY+I++IEFE LTLGTLPP I G+KVYET EK LVMEP +RWAGN
Sbjct: 92  MIRSTTKPMFAEYIGKYKIEAIEFEHLTLGTLPPIIQGLKVYETMEKDLVMEPAIRWAGN 151

Query: 186 PNVTVLLKFPFLQMNVQLVDLQIFAAPRV 272
           PN+ ++L+   +++  QLVDLQIFAAPRV
Sbjct: 152 PNIVLVLQLLSVRLRFQLVDLQIFAAPRV 180


>ref|XP_002272997.1| PREDICTED: extended synaptotagmin-2 [Vitis vinifera]
           gi|296086005|emb|CBI31446.3| unnamed protein product
           [Vitis vinifera]
          Length = 544

 Score =  126 bits (317), Expect = 2e-27
 Identities = 57/88 (64%), Positives = 75/88 (85%)
 Frame = +3

Query: 9   IKSTEEPIFADYIGKYQIQSIEFESLTLGTLPPTIYGIKVYETNEKVLVMEPIVRWAGNP 188
           I+S  +PIFA+YIG YQI++IEFE L+LGTLPP ++GIKVYETNEK L MEP ++WAGNP
Sbjct: 93  IRSMAQPIFAEYIGMYQIEAIEFEKLSLGTLPPILHGIKVYETNEKELAMEPAIKWAGNP 152

Query: 189 NVTVLLKFPFLQMNVQLVDLQIFAAPRV 272
           N+ ++LK+   ++ +QLVDLQIFAAPR+
Sbjct: 153 NIILVLKWLPFRITIQLVDLQIFAAPRI 180


>ref|XP_003536345.1| PREDICTED: tricalbin-2-like [Glycine max]
          Length = 545

 Score =  125 bits (315), Expect = 3e-27
 Identities = 57/89 (64%), Positives = 76/89 (85%)
 Frame = +3

Query: 6   MIKSTEEPIFADYIGKYQIQSIEFESLTLGTLPPTIYGIKVYETNEKVLVMEPIVRWAGN 185
           +I+ST +PIFA+YIGKYQI++I+F+ L+LGTLPPT+ G+KV ETNEK LVME +++WAGN
Sbjct: 92  IIRSTTQPIFAEYIGKYQIKAIDFDELSLGTLPPTVCGMKVLETNEKELVMEQVIKWAGN 151

Query: 186 PNVTVLLKFPFLQMNVQLVDLQIFAAPRV 272
           PN+ V L    L++ +QLVDLQIFAAPR+
Sbjct: 152 PNIVVSLYVSSLKITIQLVDLQIFAAPRI 180


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