BLASTX nr result

ID: Coptis24_contig00032606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032606
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305063.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
gb|AAT64033.1| putative growth regulator [Gossypium hirsutum]         161   6e-38
ref|XP_002265875.2| PREDICTED: DUF246 domain-containing protein ...   160   1e-37
ref|XP_002522229.1| conserved hypothetical protein [Ricinus comm...   160   1e-37
ref|XP_002316818.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37

>ref|XP_002305063.1| predicted protein [Populus trichocarpa] gi|222848027|gb|EEE85574.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  164 bits (414), Expect = 9e-39
 Identities = 81/102 (79%), Positives = 89/102 (87%)
 Frame = -3

Query: 309 NFSYLWMQLAALDFIACATADVFAMTDSGSQLSSLVSGYRIYYGGGHAPTLRPNKKRLAT 130
           NFS    QLAALDFIACATADVFAMTDSGSQLSSLVSG+R YYGGGHAPTLRPNKKRLA 
Sbjct: 54  NFS---SQLAALDFIACATADVFAMTDSGSQLSSLVSGFRTYYGGGHAPTLRPNKKRLAA 110

Query: 129 VLAENGTLRWSKFEYRVRKMIEEGQRVRARAVGKSIYRQPRC 4
           +L+ENGT+ W+ FE RVRKMI++GQ VR R  G+SIYRQPRC
Sbjct: 111 ILSENGTIGWNSFEDRVRKMIKDGQSVRIRGFGRSIYRQPRC 152


>gb|AAT64033.1| putative growth regulator [Gossypium hirsutum]
          Length = 598

 Score =  161 bits (407), Expect = 6e-38
 Identities = 82/111 (73%), Positives = 89/111 (80%), Gaps = 3/111 (2%)
 Frame = -3

Query: 327 TFLTDNN---FSYLWMQLAALDFIACATADVFAMTDSGSQLSSLVSGYRIYYGGGHAPTL 157
           T LT N    F     QLAALDFIACAT+DVFAMTDSGSQLSSLVSG+R YYG GHAPTL
Sbjct: 481 TLLTYNELAPFRNFSSQLAALDFIACATSDVFAMTDSGSQLSSLVSGFRTYYGDGHAPTL 540

Query: 156 RPNKKRLATVLAENGTLRWSKFEYRVRKMIEEGQRVRARAVGKSIYRQPRC 4
           RPNKKRLA + +EN T+ W+ FE RVRKMIEEGQRVR R  G+SIYRQPRC
Sbjct: 541 RPNKKRLAAIFSENSTIGWTTFEDRVRKMIEEGQRVRVRGSGRSIYRQPRC 591


>ref|XP_002265875.2| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis
           vinifera]
          Length = 628

 Score =  160 bits (404), Expect = 1e-37
 Identities = 80/102 (78%), Positives = 86/102 (84%)
 Frame = -3

Query: 309 NFSYLWMQLAALDFIACATADVFAMTDSGSQLSSLVSGYRIYYGGGHAPTLRPNKKRLAT 130
           NFS    QLAALDFIACATADVFAMTDSGSQLSSLVSG+R YYGGG APTLRPNKKRLA 
Sbjct: 520 NFS---SQLAALDFIACATADVFAMTDSGSQLSSLVSGFRTYYGGGRAPTLRPNKKRLAA 576

Query: 129 VLAENGTLRWSKFEYRVRKMIEEGQRVRARAVGKSIYRQPRC 4
           +L E+ T+ W  FE RV+KMIEEGQRVR R  G+SIYRQPRC
Sbjct: 577 ILMESRTIEWKSFEERVKKMIEEGQRVRVRGFGRSIYRQPRC 618


>ref|XP_002522229.1| conserved hypothetical protein [Ricinus communis]
           gi|223538482|gb|EEF40087.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 598

 Score =  160 bits (404), Expect = 1e-37
 Identities = 78/102 (76%), Positives = 88/102 (86%)
 Frame = -3

Query: 309 NFSYLWMQLAALDFIACATADVFAMTDSGSQLSSLVSGYRIYYGGGHAPTLRPNKKRLAT 130
           NFS    Q+AALDFIACAT+DVFAMTDSGSQLSSLVSG+R YYG G AP+LRPNKKRLA 
Sbjct: 492 NFS---SQMAALDFIACATSDVFAMTDSGSQLSSLVSGFRTYYGSGRAPSLRPNKKRLAA 548

Query: 129 VLAENGTLRWSKFEYRVRKMIEEGQRVRARAVGKSIYRQPRC 4
           +L+EN T+ W+ FE RVRKMIEEGQRVR R +G+SIYRQPRC
Sbjct: 549 ILSENSTIAWNSFEDRVRKMIEEGQRVRVRGIGRSIYRQPRC 590


>ref|XP_002316818.1| predicted protein [Populus trichocarpa] gi|222859883|gb|EEE97430.1|
           predicted protein [Populus trichocarpa]
          Length = 426

 Score =  160 bits (404), Expect = 1e-37
 Identities = 80/102 (78%), Positives = 86/102 (84%)
 Frame = -3

Query: 309 NFSYLWMQLAALDFIACATADVFAMTDSGSQLSSLVSGYRIYYGGGHAPTLRPNKKRLAT 130
           NFS    QLAALDFIACATADVFAMTDSGSQLSSLVSG+R YYGGGHAPTLRPNKKRLA 
Sbjct: 320 NFS---SQLAALDFIACATADVFAMTDSGSQLSSLVSGFRTYYGGGHAPTLRPNKKRLAA 376

Query: 129 VLAENGTLRWSKFEYRVRKMIEEGQRVRARAVGKSIYRQPRC 4
           +L+EN T+ W+ FE R RKMIEEGQ V  R  G+SIYRQPRC
Sbjct: 377 ILSENSTIGWNSFEDRARKMIEEGQSVLIRGFGRSIYRQPRC 418


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