BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00032600
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    84   2e-14
ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14

>ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 33/43 (76%), Positives = 40/43 (93%)
 Frame = -2

Query: 299 RICGDCHSAMKFISVSSKREIVVRDTNRFHHIKDGLCSCNDYW 171
           RICGDCHSA+K+IS+++ REI+VRD NRFHHIKDG CSCN+YW
Sbjct: 807 RICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849


>ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 33/43 (76%), Positives = 40/43 (93%)
 Frame = -2

Query: 299 RICGDCHSAMKFISVSSKREIVVRDTNRFHHIKDGLCSCNDYW 171
           RICGDCHSA+K+IS+++ REI+VRD NRFHHIKDG CSCN+YW
Sbjct: 807 RICGDCHSAIKYISMATGREIIVRDANRFHHIKDGRCSCNEYW 849


>ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 32/43 (74%), Positives = 42/43 (97%)
 Frame = -2

Query: 299 RICGDCHSAMKFISVSSKREIVVRDTNRFHHIKDGLCSCNDYW 171
           R+CGDCH+A+K+IS+++ REIVVRD+NRFHHIK+G+CSCNDYW
Sbjct: 767 RVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 809


>ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 32/43 (74%), Positives = 42/43 (97%)
 Frame = -2

Query: 299 RICGDCHSAMKFISVSSKREIVVRDTNRFHHIKDGLCSCNDYW 171
           R+CGDCH+A+K+IS+++ REIVVRD+NRFHHIK+G+CSCNDYW
Sbjct: 587 RVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 629


>ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 33/43 (76%), Positives = 39/43 (90%)
 Frame = -2

Query: 299 RICGDCHSAMKFISVSSKREIVVRDTNRFHHIKDGLCSCNDYW 171
           R+CGDCH+A+K+IS+ + REIVVRD NRFHHIKDG CSCNDYW
Sbjct: 778 RVCGDCHTAIKYISIVTGREIVVRDANRFHHIKDGKCSCNDYW 820